Literature DB >> 16174335

Models of the population genetics of transposable elements.

Arnaud Le Rouzic1, Grégory Deceliere.   

Abstract

Although transposable elements (TEs) have been found in all organisms in which they have been looked for, the ways in which they invade genomes and populations are still a matter of debate. By extending the classical models of population genetics, several approaches have been developed to account for the dynamics of TEs, especially in Drosophila melanogaster . While the formalism of these models is based on simplifications, they enable us to understand better how TEs invade genomes, as a result of multiple evolutionary forces including duplication, deletion, self-regulation, natural selection and genetic drift. The aim of this paper is to review the assumptions and the predictions of these different models by highlighting the importance of the specific characteristics of both the TEs and the hosts, and the host/TE relationships. Then, perspectives in this domain will be discussed.

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Year:  2005        PMID: 16174335     DOI: 10.1017/S0016672305007585

Source DB:  PubMed          Journal:  Genet Res        ISSN: 0016-6723            Impact factor:   1.588


  30 in total

1.  Population genetics models of competition between transposable element subfamilies.

Authors:  Arnaud Le Rouzic; Pierre Capy
Journal:  Genetics       Date:  2006-08-03       Impact factor: 4.562

Review 2.  Applying mobile genetic elements for genome analysis and evolution.

Authors:  Wolfgang J Miller; Pierre Capy
Journal:  Mol Biotechnol       Date:  2006-06       Impact factor: 2.695

3.  Long-term evolution of transposable elements.

Authors:  Arnaud Le Rouzic; Thibaud S Boutin; Pierre Capy
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-26       Impact factor: 11.205

4.  Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata.

Authors:  Steven Lockton; Jeffrey Ross-Ibarra; Brandon S Gaut
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-04       Impact factor: 11.205

5.  The effects of recombination rate on the distribution and abundance of transposable elements.

Authors:  Elie S Dolgin; Brian Charlesworth
Journal:  Genetics       Date:  2008-04       Impact factor: 4.562

Review 6.  The struggle for life of the genome's selfish architects.

Authors:  Aurélie Hua-Van; Arnaud Le Rouzic; Thibaud S Boutin; Jonathan Filée; Pierre Capy
Journal:  Biol Direct       Date:  2011-03-17       Impact factor: 4.540

7.  Birth, death, and diversification of mobile promoters in prokaryotes.

Authors:  Mark W J van Passel; Harm Nijveen; Lindi M Wahl
Journal:  Genetics       Date:  2014-02-27       Impact factor: 4.562

8.  Talua SINE biology in the genome of the Reticulitermes subterranean termites (Isoptera, Rhinotermitidae).

Authors:  Andrea Luchetti; Barbara Mantovani
Journal:  J Mol Evol       Date:  2009-11-11       Impact factor: 2.395

9.  Characterization and comparative analysis of sequence-specific amplified polymorphisms based on two subfamilies of IRRE retrotransposons in Iris missouriensis (Iridaceae).

Authors:  R Scott Cornman; Michael L Arnold
Journal:  Genetica       Date:  2008-02-23       Impact factor: 1.082

10.  Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in Drosophila.

Authors:  Jian Lu; Andrew G Clark
Journal:  Genome Res       Date:  2009-11-30       Impact factor: 9.043

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