Literature DB >> 16170624

CHRONIS: an animal chromosome image database.

Shin-Ichi Toyabe1, Kouhei Akazawa, Daisuke Fukushi, Kiichi Fukui, Tatsuo Ushiki.   

Abstract

We have constructed a database system named CHRONIS (CHROmosome and Nano-Information System) to collect images of animal chromosomes and related nanotechnological information. CHRONIS enables rapid sharing of information on chromosome research among cell biologists and researchers in other fields via the Internet. CHRONIS is also intended to serve as a liaison tool for researchers who work in different centers. The image database contains more than 3,000 color microscopic images, including karyotypic images obtained from more than 1,000 species of animals. Researchers can browse the contents of the database using a usual World Wide Web interface in the following URL: http://chromosome.med.niigata-u.ac.jp/chronis/servlet/chronisservlet. The system enables users to input new images into the database, to locate images of interest by keyword searches, and to display the images with detailed information. CHRONIS has a wide range of applications, such as searching for appropriate probes for fluorescent in situ hybridization, comparing various kinds of microscopic images of a single species, and finding researchers working in the same field of interest.

Mesh:

Year:  2005        PMID: 16170624     DOI: 10.1007/s10577-005-0985-6

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  19 in total

1.  Three-dimensional structure of G-banded human metaphase chromosomes observed by atomic force microscopy.

Authors:  O Hoshi; T Ushiki
Journal:  Arch Histol Cytol       Date:  2001-12

Review 2.  The structure of human metaphase chromosomes: its histological perspective and new horizons by atomic force microscopy.

Authors:  Tatsuo Ushiki; Osamu Hoshi; Kousuke Iwai; Eiji Kimura; Masatsugu Shigeno
Journal:  Arch Histol Cytol       Date:  2002-12

Review 3.  FISH, CGH, and SKY in the diagnosis of childhood acute lymphoblastic leukemia.

Authors:  Susan Mathew; Susana C Raimondi
Journal:  Methods Mol Biol       Date:  2003

4.  The B chromosome database.

Authors:  R N Jones; M Díez
Journal:  Cytogenet Genome Res       Date:  2004       Impact factor: 1.636

5.  High-resolution imaging of chromosome-related structures by atomic force microscopy.

Authors:  B G De Grooth; C A Putman
Journal:  J Microsc       Date:  1992-12       Impact factor: 1.758

6.  Scanning probe microscopy. Probing the future.

Authors:  M Miles
Journal:  Science       Date:  1997-09-19       Impact factor: 47.728

Review 7.  Probing chromatin with the scanning force microscope.

Authors:  W Fritzsche; A Schaper; T M Jovin
Journal:  Chromosoma       Date:  1994-07       Impact factor: 4.316

8.  Atomic force microscopy of human metaphase chromosomes after differential staining of sister chromatids.

Authors:  Eiji Kimura; Osamu Hoshi; Tatsuo Ushiki
Journal:  Arch Histol Cytol       Date:  2004-06

9.  Identification of the mouse karyotype by quinacrine fluorescence, and tentative assignment of seven linkage groups.

Authors:  O J Miller; D A Miller; R E Kouri; P W Allderdice; V G Dev; M S Grewal; J J Hutton
Journal:  Proc Natl Acad Sci U S A       Date:  1971-07       Impact factor: 11.205

10.  Imaging of human metaphase chromosomes by atomic force microscopy in liquid.

Authors:  O Hoshi; R Owen; M Miles; T Ushiki
Journal:  Cytogenet Genome Res       Date:  2004       Impact factor: 1.636

View more
  1 in total

1.  Fish Karyome: A karyological information network database of Indian Fishes.

Authors:  Naresh Sahebrao Nagpure; Ajey Kumar Pathak; Rameshwar Pati; Shri Prakash Singh; Mahender Singh; Uttam Kumar Sarkar; Basdeo Kushwaha; Ravindra Kumar
Journal:  Bioinformation       Date:  2012-05-15
  1 in total

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