Literature DB >> 16169974

Fluorescence lifetime heterogeneity resolution in the frequency domain by lifetime moments analysis.

Alessandro Esposito1, Hans C Gerritsen, Fred S Wouters.   

Abstract

Fluorescence lifetime imaging microscopy presents a powerful tool in biology and biophysics because it allows the investigation of the local environment of a fluorochrome in living cells in a quantitative manner. Furthermore, imaging Förster-type resonance energy transfer (FRET) by fluorescence lifetime imaging microscopy enables protein-protein interactions and intermolecular distances to be mapped under physiological conditions. Quantitative and precise data analysis methods are required to access the richness of information that is contained in FRET data on biological samples. Lifetime detection in the frequency-domain yields two lifetime estimations. The lifetime moments analysis (LiMA) provides a quantitative measure of the lifetime distribution broadness by exploiting the analytical relationship between the phase- and demodulation-lifetime estimations and relating them to the weighted average and variance of the lifetime distribution. The LiMA theoretical framework is validated by comparison with global analysis and by applying it to a constrained two-component FRET system using simulations and experiments. Furthermore, a novel LIMA-based error analysis and a more intuitive formalism for global analysis are presented. Finally, a new method to resolve a FRET system is proposed and experimentally applied to the investigation of protein-protein interactions.

Mesh:

Year:  2005        PMID: 16169974      PMCID: PMC1366993          DOI: 10.1529/biophysj.104.053397

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  19 in total

1.  Fluorescence lifetime imaging: multi-point calibration, minimum resolvable differences, and artifact suppression.

Authors:  Q S Hanley; V Subramaniam; D J Arndt-Jovin; T M Jovin
Journal:  Cytometry       Date:  2001-04-01

2.  Fluorescence lifetime heterogeneity in aggregates of LHCII revealed by time-resolved microscopy.

Authors:  V Barzda; C J de Grauw; J Vroom; F J Kleima; R van Grondelle; H van Amerongen; H C Gerritsen
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

Review 3.  Imaging biochemistry inside cells.

Authors:  F S Wouters; P J Verveer; P I Bastiaens
Journal:  Trends Cell Biol       Date:  2001-05       Impact factor: 20.808

4.  Graphical representation and multicomponent analysis of single-frequency fluorescence lifetime imaging microscopy data.

Authors:  A H A Clayton; Q S Hanley; P J Verveer
Journal:  J Microsc       Date:  2004-01       Impact factor: 1.758

5.  Evaluation of global analysis algorithms for single frequency fluorescence lifetime imaging microscopy data.

Authors:  P J Verveer; P I H Bastiaens
Journal:  J Microsc       Date:  2003-01       Impact factor: 1.758

Review 6.  Molecular dynamics and interactions for creation of stimulation-induced stabilized rafts from small unstable steady-state rafts.

Authors:  Akihiro Kusumi; Ikuko Koyama-Honda; Kenichi Suzuki
Journal:  Traffic       Date:  2004-04       Impact factor: 6.215

7.  Imaging fluorescence lifetime heterogeneity applied to GFP-tagged MHC protein at an immunological synapse.

Authors:  B Treanor; P M P Lanigan; K Suhling; T Schreiber; I Munro; M A A Neil; D Phillips; D M Davis; P M W French
Journal:  J Microsc       Date:  2005-01       Impact factor: 1.758

8.  Fluorescence lifetime imaging by asynchronous pump-probe microscopy.

Authors:  C Y Dong; P T So; T French; E Gratton
Journal:  Biophys J       Date:  1995-12       Impact factor: 4.033

9.  A continuously variable frequency cross-correlation phase fluorometer with picosecond resolution.

Authors:  E Gratton; M Limkeman
Journal:  Biophys J       Date:  1983-12       Impact factor: 4.033

10.  Fluorescence lifetime imaging of nuclear DNA: effect of fluorescence resonance energy transfer.

Authors:  S Murata; P Herman; H J Lin; J R Lakowicz
Journal:  Cytometry       Date:  2000-11-01
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  19 in total

1.  Rotaviruses associate with cellular lipid droplet components to replicate in viroplasms, and compounds disrupting or blocking lipid droplets inhibit viroplasm formation and viral replication.

Authors:  Winsome Cheung; Michael Gill; Alessandro Esposito; Clemens F Kaminski; Nathalie Courousse; Serge Chwetzoff; Germain Trugnan; Nandita Keshavan; Andrew Lever; Ulrich Desselberger
Journal:  J Virol       Date:  2010-03-24       Impact factor: 5.103

2.  Molecular fluorescence, phosphorescence, and chemiluminescence spectrometry.

Authors:  Kristin A Fletcher; Sayo O Fakayode; Mark Lowry; Sheryl A Tucker; Sharon L Neal; Irene W Kimaru; Matthew E McCarroll; Gabor Patonay; Philip B Oldham; Oleksandr Rusin; Robert M Strongin; Isiah M Warner
Journal:  Anal Chem       Date:  2006-06-15       Impact factor: 6.986

3.  Quantitative lifetime unmixing of multiexponentially decaying fluorophores using single-frequency fluorescence lifetime imaging microscopy.

Authors:  Gert-Jan Kremers; Erik B van Munster; Joachim Goedhart; Theodorus W J Gadella
Journal:  Biophys J       Date:  2008-03-21       Impact factor: 4.033

4.  Quantitative analysis of fluorescence lifetime imaging made easy.

Authors:  Fred S Wouters; Alessandro Esposito
Journal:  HFSP J       Date:  2008-01-18

5.  Quantitative FRET analysis by fast acquisition time domain FLIM at high spatial resolution in living cells.

Authors:  Sergi Padilla-Parra; Nicolas Audugé; Maïté Coppey-Moisan; Marc Tramier
Journal:  Biophys J       Date:  2008-06-06       Impact factor: 4.033

6.  Subcellular localization-dependent changes in EGFP fluorescence lifetime measured by time-resolved flow cytometry.

Authors:  Ali Vaziri Gohar; Ruofan Cao; Patrick Jenkins; Wenyan Li; Jessica P Houston; Kevin D Houston
Journal:  Biomed Opt Express       Date:  2013-07-19       Impact factor: 3.732

7.  Intensity correlation-based calibration of FRET.

Authors:  László Bene; Tamás Ungvári; Roland Fedor; László Sasi Szabó; László Damjanovich
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

8.  Electrostatic interactions positively regulate K-Ras nanocluster formation and function.

Authors:  Sarah J Plowman; Nicholas Ariotti; Andrew Goodall; Robert G Parton; John F Hancock
Journal:  Mol Cell Biol       Date:  2008-05-05       Impact factor: 4.272

9.  BAG1 restores formation of functional DJ-1 L166P dimers and DJ-1 chaperone activity.

Authors:  Sebastian Deeg; Mathias Gralle; Kamila Sroka; Mathias Bähr; Fred Silvester Wouters; Pawel Kermer
Journal:  J Cell Biol       Date:  2010-02-15       Impact factor: 10.539

Review 10.  The potential of optical proteomic technologies to individualize prognosis and guide rational treatment for cancer patients.

Authors:  Muireann T Kelleher; Gilbert Fruhwirth; Gargi Patel; Enyinnaya Ofo; Frederic Festy; Paul R Barber; Simon M Ameer-Beg; Borivoj Vojnovic; Cheryl Gillett; Anthony Coolen; György Kéri; Paul A Ellis; Tony Ng
Journal:  Target Oncol       Date:  2009-09-16       Impact factor: 4.493

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