Literature DB >> 16166676

Gaetbulibacter saemankumensis gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a tidal flat sediment in Korea.

Seo-Youn Jung1, So-Jung Kang1, Mi-Hwa Lee1, Soo-Young Lee1, Tae-Kwang Oh1, Jung-Hoon Yoon1.   

Abstract

Three Gram-negative, yellow-pigmented, rod-shaped bacterial strains, SMK-12(T), SMK-36 and SMK-45, were isolated from a tidal flat sediment of the Yellow Sea in Korea, and their taxonomic positions were investigated by a polyphasic approach. The three strains grew optimally at 25-30 degrees C and in the presence of 2-3% (w/v) NaCl. They contained MK-6 as the predominant menaquinone. The major cellular fatty acids were iso-C(15:0), iso-C(17:0) 3-OH, iso-C(15:1), anteiso-C(15:0), iso-C(15:0) 3-OH and C(16:1)omega7c and/or iso-C(15:0) 2-OH. The DNA G+C contents of the three strains were 34.7-34.9 mol%. The phylogenetic tree based on 16S rRNA gene sequences revealed that the three strains form one distinct evolutionary lineage supported by a bootstrap value of 100 % within the family Flavobacteriaceae. The three strains exhibited 16S rRNA gene sequence similarity levels of 93.8-94.9% to the nearest phylogenetic neighbours, the genera Algibacter, Bizionia and Formosa. On the basis of differences in phenotypic characteristics and phylogenetic distinctiveness, strains SMK-12(T), SMK-36 and SMK-45 were classified in a novel genus and species, for which the name Gaetbulibacter saemankumensis gen. nov., sp. nov. is proposed. The type strain for the novel species is SMK-12(T) (=KCTC 12379(T)=DSM 17032(T)).

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Year:  2005        PMID: 16166676     DOI: 10.1099/ijs.0.63738-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Gaetbulibacter jejuensis sp. nov., isolated from seawater.

Authors:  You-Sung Oh; Sang-Bin Lim; Hyung-Yeel Kahng; Byoung-Jun Yoon; Duck-Chul Oh; Jae-Ho Joa; Dong-Heon Lee
Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

2.  Antarcticimonas flava gen. nov., sp. nov., isolated from Antarctic coastal seawater.

Authors:  Seung-Jo Yang; Hyun-Myung Oh; Sangyun Chung; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2009-10-24       Impact factor: 3.422

3.  Genome analysis of Flaviramulus ichthyoenteri Th78(T) in the family Flavobacteriaceae: insights into its quorum quenching property and potential roles in fish intestine.

Authors:  Yunhui Zhang; Jiwen Liu; Kaihao Tang; Min Yu; Tom Coenye; Xiao-Hua Zhang
Journal:  BMC Genomics       Date:  2015-02-05       Impact factor: 3.969

4.  Illumina sequencing-based analysis of sediment bacteria community in different trophic status freshwater lakes.

Authors:  Yu Wan; Xiaohong Ruan; Yaping Zhang; Rongfu Li
Journal:  Microbiologyopen       Date:  2017-02-07       Impact factor: 3.139

5.  Extremophiles in Soil Communities of Former Copper Mining Sites of the East Harz Region (Germany) Reflected by Re-Analyzed 16S rRNA Data.

Authors:  J Michael Köhler; Nancy Beetz; Peter Mike Günther; Frances Möller; Jialan Cao
Journal:  Microorganisms       Date:  2021-06-30
  5 in total

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