Literature DB >> 16166529

DOS(Ec), a heme-regulated phosphodiesterase, plays an important role in the regulation of the cyclic AMP level in Escherichia coli.

Tokiko Yoshimura-Suzuki1, Ikuko Sagami, Nao Yokota, Hirofumi Kurokawa, Toru Shimizu.   

Abstract

Heme-regulated phosphodiesterase from Escherichia coli (DOS(Ec)) catalyzes the hydrolysis of cyclic AMP (cAMP) in vitro and is regulated by the redox state of the bound heme. Changes in the redox state result in alterations in the three-dimensional structure of the enzyme, which is then transmitted to the functional domain to switch catalysis on or off. Because DOS(Ec) was originally cloned from E. coli genomic DNA, it has not been known whether it is actually expressed in wild-type E. coli. In addition, the turnover number of DOS(Ec) using cAMP as a substrate is only 0.15 min(-1), which is relatively low for a physiologically relevant enzyme. In the present study, we demonstrated for the first time that the DOS(Ec) gene and protein are expressed in wild-type E. coli, especially under aerobic conditions. We also developed a DOS(Ec) gene knockout strain (Deltados). Interestingly, the knockout of dos caused excess accumulation of intracellular cAMP (26-fold higher than in the wild-type strain) under aerobic conditions, whereas accumulation of cAMP was not observed under anaerobic conditions. We also found differences in cell morphology and growth rate between the mutant cells and the wild-type strain. The changes in the knockout strain were partially complemented by introducing an expression plasmid for dos. Thus, the present study revealed that expression of DOS(Ec) is regulated according to environmental O2 availability at the transcriptional level and that the concentration of cAMP in cells is regulated by DOS(Ec) expression.

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Year:  2005        PMID: 16166529      PMCID: PMC1251570          DOI: 10.1128/JB.187.19.6678-6682.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor.

Authors:  A L Chang; J R Tuckerman; G Gonzalez; R Mayer; H Weinhouse; G Volman; D Amikam; M Benziman; M A Gilles-Gonzalez
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

2.  HemK, a class of protein methyl transferase with similarity to DNA methyl transferases, methylates polypeptide chain release factors, and hemK knockout induces defects in translational termination.

Authors:  Kenji Nakahigashi; Naoko Kubo; Shin-ichiro Narita; Takeshi Shimaoka; Simon Goto; Taku Oshima; Hirotada Mori; Maki Maeda; Chieko Wada; Hachiro Inokuchi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

3.  Cyclic AMP phosphodiesterase of Escherichia coli.

Authors:  L D Nielsen; H V Rickenberg
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

4.  Characterization of a direct oxygen sensor heme protein from Escherichia coli. Effects of the heme redox states and mutations at the heme-binding site on catalysis and structure.

Authors:  Yukie Sasakura; Satoshi Hirata; Shunpei Sugiyama; Shingo Suzuki; Sue Taguchi; Miki Watanabe; Toshitaka Matsui; Ikuko Sagami; Toru Shimizu
Journal:  J Biol Chem       Date:  2002-04-22       Impact factor: 5.157

5.  Relationships between heme incorporation, tetramer formation, and catalysis of a heme-regulated phosphodiesterase from Escherichia coli: a study of deletion and site-directed mutants.

Authors:  Tokiko Yoshimura; Ikuko Sagami; Yukie Sasakura; Toru Shimizu
Journal:  J Biol Chem       Date:  2003-10-09       Impact factor: 5.157

6.  Cyclic 3',5'-adenosine monophosphate phosphodiesterase of Escherichia coli.

Authors:  L D Nielsen; D Monard; H V Rickenberg
Journal:  J Bacteriol       Date:  1973-11       Impact factor: 3.490

Review 7.  Signal transduction by heme-containing PAS-domain proteins.

Authors:  Marie-Alda Gilles-Gonzalez; Gonzalo Gonzalez
Journal:  J Appl Physiol (1985)       Date:  2004-02

8.  Stationary and time-resolved resonance Raman spectra of His77 and Met95 mutants of the isolated heme domain of a direct oxygen sensor from Escherichia coli.

Authors:  Akira Sato; Yukie Sasakura; Shunpei Sugiyama; Ikuko Sagami; Toru Shimizu; Yasuhisa Mizutani; Teizo Kitagawa
Journal:  J Biol Chem       Date:  2002-06-21       Impact factor: 5.157

9.  Binding of oxygen and carbon monoxide to a heme-regulated phosphodiesterase from Escherichia coli. Kinetics and infrared spectra of the full-length wild-type enzyme, isolated PAS domain, and Met-95 mutants.

Authors:  Sue Taguchi; Toshitaka Matsui; Jotaro Igarashi; Yukie Sasakura; Yasuyuki Araki; Osamu Ito; Shunpei Sugiyama; Ikuko Sagami; Toru Shimizu
Journal:  J Biol Chem       Date:  2003-11-11       Impact factor: 5.157

10.  A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor.

Authors:  Hirofumi Kurokawa; Dong-Sun Lee; Miki Watanabe; Ikuko Sagami; Bunzo Mikami; C S Raman; Toru Shimizu
Journal:  J Biol Chem       Date:  2004-02-23       Impact factor: 5.157

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  3 in total

Review 1.  Environmental heme-based sensor proteins: implications for understanding bacterial pathogenesis.

Authors:  Aisha Farhana; Vikram Saini; Ashwani Kumar; Jack R Lancaster; Adrie J C Steyn
Journal:  Antioxid Redox Signal       Date:  2012-06-13       Impact factor: 8.401

2.  Heme ligand binding properties and intradimer interactions in the full-length sensor protein dos from Escherichia coli and its isolated heme domain.

Authors:  Christophe Lechauve; Latifa Bouzhir-Sima; Taku Yamashita; Michael C Marden; Marten H Vos; Ursula Liebl; Laurent Kiger
Journal:  J Biol Chem       Date:  2009-10-28       Impact factor: 5.157

Review 3.  The Heme-Based Oxygen-Sensor Phosphodiesterase Ec DOS (DosP): Structure-Function Relationships.

Authors:  Toru Shimizu
Journal:  Biosensors (Basel)       Date:  2013-06-17
  3 in total

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