Literature DB >> 16164994

Evolution of the tRNA(Tyr)/TyrRS aminoacylation systems.

Luc Bonnefond1, Richard Giegé, Joëlle Rudinger-Thirion.   

Abstract

The tRNA identity rules ensuring fidelity of translation are globally conserved throughout evolution except for tyrosyl-tRNA synthetases (TyrRSs) that display species-specific tRNA recognition. This discrimination originates from the presence of a conserved identity pair, G1-C72, located at the top of the acceptor stem of tRNA(Tyr) from eubacteria that is invariably replaced by an unusual C1-G72 pair in archaeal and eubacterial tRNA(Tyr). In addition to the key role of pair 1-72 in tyrosylation, discriminator base A73, the anticodon triplet and the large variable region (present in eubacterial tRNA(Tyr) but not found in eukaryal tRNA(Tyr)) contribute to tyrosylation with variable strengths. Crystallographic structures of two tRNA(Tyr)/TyrRS complexes revealed different interaction modes in accordance with the phylum-specificity. Recent functional studies on the human mitochondrial tRNA(Tyr)/TyrRS system indicates strong deviations from the canonical tyrosylation rules. These differences are discussed in the light of the present knowledge on TyrRSs.

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Year:  2005        PMID: 16164994     DOI: 10.1016/j.biochi.2005.03.008

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  24 in total

1.  Conformational flexibility of cytokine-like C-module of tyrosyl-tRNA synthetase monitored by Trp144 intrinsic fluorescence.

Authors:  Mariya Kordysh; Alexander Kornelyuk
Journal:  J Fluoresc       Date:  2006-09-06       Impact factor: 2.217

2.  Dominant mutations in the tyrosyl-tRNA synthetase gene recapitulate in Drosophila features of human Charcot-Marie-Tooth neuropathy.

Authors:  Erik Storkebaum; Ricardo Leitão-Gonçalves; Tanja Godenschwege; Leslie Nangle; Monica Mejia; Inge Bosmans; Tinne Ooms; An Jacobs; Patrick Van Dijck; Xiang-Lei Yang; Paul Schimmel; Koen Norga; Vincent Timmerman; Patrick Callaerts; Albena Jordanova
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-26       Impact factor: 11.205

3.  Dissociating quaternary structure regulates cell-signaling functions of a secreted human tRNA synthetase.

Authors:  My-Nuong Vo; Xiang-Lei Yang; Paul Schimmel
Journal:  J Biol Chem       Date:  2011-02-10       Impact factor: 5.157

4.  The double-length tyrosyl-tRNA synthetase from the eukaryote Leishmania major forms an intrinsically asymmetric pseudo-dimer.

Authors:  Eric T Larson; Jessica E Kim; Lisa J Castaneda; Alberto J Napuli; Zhongsheng Zhang; Erkang Fan; Frank H Zucker; Christophe L M J Verlinde; Frederick S Buckner; Wesley C Van Voorhis; Wim G J Hol; Ethan A Merritt
Journal:  J Mol Biol       Date:  2011-03-21       Impact factor: 5.469

5.  Structural states of the flexible catalytic loop of M. tuberculosis tyrosyl-tRNA synthetase in different enzyme-substrate complexes.

Authors:  Vasyl V Mykuliak; Anatoliy I Dragan; Alexander I Kornelyuk
Journal:  Eur Biophys J       Date:  2014-11-06       Impact factor: 1.733

6.  A genetically encoded fluorescent probe in mammalian cells.

Authors:  Abhishek Chatterjee; Jiantao Guo; Hyun Soo Lee; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2013-08-14       Impact factor: 15.419

7.  Comparison and functional implications of the 3D architectures of viral tRNA-like structures.

Authors:  John A Hammond; Robert P Rambo; Megan E Filbin; Jeffrey S Kieft
Journal:  RNA       Date:  2009-02       Impact factor: 4.942

8.  Comparative structural dynamics of Tyrosyl-tRNA synthetase complexed with different substrates explored by molecular dynamics.

Authors:  Tong Li; Matheus Froeyen; Piet Herdewijn
Journal:  Eur Biophys J       Date:  2008-06-17       Impact factor: 1.733

9.  Virus-encoded aminoacyl-tRNA synthetases: structural and functional characterization of mimivirus TyrRS and MetRS.

Authors:  Chantal Abergel; Joëlle Rudinger-Thirion; Richard Giegé; Jean-Michel Claverie
Journal:  J Virol       Date:  2007-09-12       Impact factor: 5.103

10.  Crystal structure of Pyrococcus horikoshii tryptophanyl-tRNA synthetase and structure-based phylogenetic analysis suggest an archaeal origin of tryptophanyl-tRNA synthetase.

Authors:  Xianchi Dong; Minyun Zhou; Chen Zhong; Bei Yang; Ning Shen; Jianping Ding
Journal:  Nucleic Acids Res       Date:  2009-11-26       Impact factor: 16.971

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