Literature DB >> 16153739

Gene factories, microfunctionalization and the evolution of gene families.

John M Hancock1.   

Abstract

Gene duplication has long been considered an important force in genome evolution. In this article, I consider families of tandemly duplicated genes that show 'microfunctionalization' - genes encoding similar proteins with subtly different functions, such as olfactory receptors. I discuss the genomic processes giving rise to such microfunctionalized gene families and suggest that, like sites of chromosomal rearrangement and breakage, they are associated with relatively high concentrations of repetitive elements. I suggest that microfunctionalized gene families arise within gene factories: genomic regions rich in repetitive elements that undergo increased levels of unequal crossing-over.

Mesh:

Year:  2005        PMID: 16153739     DOI: 10.1016/j.tig.2005.08.008

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  16 in total

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Authors:  M Choudhary; Xie Zanhua; Y X Fu; S Kaplan
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

2.  Extensive functional diversification of the Populus glutathione S-transferase supergene family.

Authors:  Ting Lan; Zhi-Ling Yang; Xue Yang; Yan-Jing Liu; Xiao-Ru Wang; Qing-Yin Zeng
Journal:  Plant Cell       Date:  2009-12-08       Impact factor: 11.277

3.  Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins).

Authors:  Lindsay Porter; Željko Radulović; Tae Kim; Gloria R C Braz; Itabajara Da Silva Vaz; Albert Mulenga
Journal:  Ticks Tick Borne Dis       Date:  2014-09-18       Impact factor: 3.744

4.  Evolution of growth hormone in primates: the GH gene clusters of the New World monkeys marmoset (Callithrix jacchus) and white-fronted capuchin (Cebus albifrons).

Authors:  O Caryl Wallis; Michael Wallis
Journal:  J Mol Evol       Date:  2006-09-26       Impact factor: 2.395

5.  Significant gene content variation characterizes the genomes of inbred mouse strains.

Authors:  Gene Cutler; Lisa A Marshall; Ni Chin; Helene Baribault; Paul D Kassner
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

6.  Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice.

Authors:  Derek J Gingerich; Kousuke Hanada; Shin-Han Shiu; Richard D Vierstra
Journal:  Plant Cell       Date:  2007-08-24       Impact factor: 11.277

7.  Bovine ncRNAs are abundant, primarily intergenic, conserved and associated with regulatory genes.

Authors:  Zhipeng Qu; David L Adelson
Journal:  PLoS One       Date:  2012-08-06       Impact factor: 3.240

Review 8.  The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics.

Authors:  Anthony Levasseur; Pierre Pontarotti
Journal:  Biol Direct       Date:  2011-02-18       Impact factor: 4.540

9.  Protein coalitions in a core mammalian biochemical network linked by rapidly evolving proteins.

Authors:  Chrysanthi Ainali; Michelle Simon; Shiri Freilich; Octavio Espinosa; Lee Hazelwood; Sophia Tsoka; Christos A Ouzounis; John M Hancock
Journal:  BMC Evol Biol       Date:  2011-05-25       Impact factor: 3.260

10.  Novel role of ATPase subunit C targeting peptides beyond mitochondrial protein import.

Authors:  Cristofol Vives-Bauza; Jordi Magrané; Antoni L Andreu; Giovanni Manfredi
Journal:  Mol Biol Cell       Date:  2009-11-04       Impact factor: 4.138

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