Literature DB >> 16150607

REFOLD: an analytical database of protein refolding methods.

Michelle K M Chow1, Abdullah A Amin, Kate F Fulton, James C Whisstock, Ashley M Buckle, Stephen P Bottomley.   

Abstract

The expression and harvesting of proteins from insoluble inclusion bodies by solubilization and refolding is a technique commonly used in the production of recombinant proteins. To bring clarity to the large and widespread quantity of published protein refolding data, we have recently established the REFOLD database (http://refold.med.monash.edu.au), which is a freely available, open repository for protocols describing the refolding and purification of recombinant proteins. Refolding methods are currently published in many different formats and resources--REFOLD provides a standardized system for the structured reporting and presentation of these data. Furthermore, data in REFOLD are readily accessible using a simple search function, and the database also enables analyses which identify and highlight particular trends between suitable refolding and purification conditions and specific protein properties. This information may in turn serve to facilitate the rational design and development of new refolding protocols for novel proteins. There are approximately 200 proteins currently listed in REFOLD, and it is anticipated that with the continued contribution of data by researchers this number will grow significantly, thus strengthening the emerging trends and patterns and making this database a valuable tool for the scientific community.

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Year:  2005        PMID: 16150607     DOI: 10.1016/j.pep.2005.07.022

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  12 in total

1.  Experimental optimization of protein refolding with a genetic algorithm.

Authors:  Bernd Anselment; Danae Baerend; Elisabeth Mey; Johannes Buchner; Dirk Weuster-Botz; Martin Haslbeck
Journal:  Protein Sci       Date:  2010-11       Impact factor: 6.725

2.  Enhancing the stability and solubility of TEV protease using in silico design.

Authors:  Lisa D Cabrita; Dimitri Gilis; Amy L Robertson; Yves Dehouck; Marianne Rooman; Stephen P Bottomley
Journal:  Protein Sci       Date:  2007-09-28       Impact factor: 6.725

3.  A comparative approach to strategies for cloning, expression, and purification of Mycobacterium tuberculosis mycolyl transferase 85B and evaluation of immune responses in BALB/c mice.

Authors:  Haniyeh Aghababa; Ashraf Mohabati Mobarez; Nima Khoramabadi; Mehrdad Behmanesh; Mehdi Mahdavi; Majid Tebianian; Mehdi Nejati
Journal:  Mol Biotechnol       Date:  2014-06       Impact factor: 2.695

4.  Trans-cyclohexanediamines prevent thermal inactivation of protein: role of hydrophobic and electrostatic interactions.

Authors:  Atsushi Hirano; Hiroyuki Hamada; Kentaro Shiraki
Journal:  Protein J       Date:  2008-06       Impact factor: 2.371

5.  Refolding of G protein alpha subunits from inclusion bodies expressed in Escherichia coli.

Authors:  Emily McCusker; Anne Skaja Robinson
Journal:  Protein Expr Purif       Date:  2007-12-08       Impact factor: 1.650

6.  Correlation between thermal aggregation and stability of lysozyme with salts described by molar surface tension increment: an exceptional propensity of ammonium salts as aggregation suppressor.

Authors:  Atsushi Hirano; Hiroyuki Hamada; Tatsunori Okubo; Takumi Noguchi; Hiroki Higashibata; Kentaro Shiraki
Journal:  Protein J       Date:  2007-09       Impact factor: 2.371

7.  The REFOLD database: a tool for the optimization of protein expression and refolding.

Authors:  Michelle K M Chow; Abdullah A Amin; Kate F Fulton; Thushan Fernando; Lawrence Kamau; Chris Batty; Michael Louca; Storm Ho; James C Whisstock; Stephen P Bottomley; Ashley M Buckle
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

8.  Characterization of the 4,6-α-glucanotransferase GTFB enzyme of Lactobacillus reuteri 121 isolated from inclusion bodies.

Authors:  Yuxiang Bai; Rachel Maria van der Kaaij; Albert Jan Jacob Woortman; Zhengyu Jin; Lubbert Dijkhuizen
Journal:  BMC Biotechnol       Date:  2015-06-09       Impact factor: 2.563

Review 9.  Inclusion bodies: not that bad….

Authors:  Ana Ramón; Mario Señorale-Pose; Mónica Marín
Journal:  Front Microbiol       Date:  2014-02-14       Impact factor: 5.640

10.  A Rapid Method for Refolding Cell Surface Receptors and Ligands.

Authors:  Lu Zhai; Ling Wu; Feng Li; Robert S Burnham; Juan C Pizarro; Bin Xu
Journal:  Sci Rep       Date:  2016-05-24       Impact factor: 4.379

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