Literature DB >> 16146631

Enhancement and inhibition of DNA transcriptional activity by spermine: a marked difference between linear and circular templates.

François Luckel1, Koji Kubo, Kanta Tsumoto, Kenichi Yoshikawa.   

Abstract

We compared the transcriptional activities of the circular and linear forms of short (4kbp) and giant (106kbp) DNA molecules in the presence of a polyamine, spermine (4+). With an increase in the spermine concentration, transcriptional activity was enhanced, followed by an inhibitory effect, and complete inhibition was observed in the sole case of long, linear templates. A difference between the transcriptional properties of circular and linear conformations is found for giant DNA molecules. These results are discussed in relation to DNA conformational transitions.

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Year:  2005        PMID: 16146631     DOI: 10.1016/j.febslet.2005.07.095

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  11 in total

1.  Transcription of giant DNA complexed with cationic nanoparticles as a simple model of chromatin.

Authors:  Anatoly A Zinchenko; François Luckel; Kenichi Yoshikawa
Journal:  Biophys J       Date:  2006-12-01       Impact factor: 4.033

2.  Spermidine strongly increases the fidelity of Escherichia coli CRISPR Cas1-Cas2 integrase.

Authors:  Pierre Plateau; Clara Moch; Sylvain Blanquet
Journal:  J Biol Chem       Date:  2019-06-06       Impact factor: 5.157

3.  Substitution-inert trinuclear platinum complexes efficiently condense/aggregate nucleic acids and inhibit enzymatic activity.

Authors:  Jaroslav Malina; Nicholas P Farrell; Viktor Brabec
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-24       Impact factor: 15.336

4.  Loosening of DNA/polycation complexes by synthetic polyampholyte to improve the transcription efficiency: effect of charge balance in the polyampholyte.

Authors:  Chieko Yoshihara; Chwen-Yang Shew; Tomoko Ito; Yoshiyuki Koyama
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

5.  Global DNA Compaction in Stationary-Phase Bacteria Does Not Affect Transcription.

Authors:  Richard Janissen; Mathia M A Arens; Natalia N Vtyurina; Zaïda Rivai; Nicholas D Sunday; Behrouz Eslami-Mossallam; Alexey A Gritsenko; Liedewij Laan; Dick de Ridder; Irina Artsimovitch; Nynke H Dekker; Elio A Abbondanzieri; Anne S Meyer
Journal:  Cell       Date:  2018-07-26       Impact factor: 41.582

6.  Sequence-dependent DNA condensation as a driving force of DNA phase separation.

Authors:  Hyunju Kang; Jejoong Yoo; Byeong-Kwon Sohn; Seung-Won Lee; Hong Soo Lee; Wenjie Ma; Jung-Min Kee; Aleksei Aksimentiev; Hajin Kim
Journal:  Nucleic Acids Res       Date:  2018-10-12       Impact factor: 16.971

Review 7.  Nonspecific characteristics of macromolecules create specific effects in living cells.

Authors:  Kanta Tsumoto; Hiroki Sakuta; Kingo Takiguchi; Kenichi Yoshikawa
Journal:  Biophys Rev       Date:  2020-03-06

8.  Effects of Structural Isomers of Spermine on the Higher-Order Structure of DNA and Gene Expression.

Authors:  Tomoki Kitagawa; Takashi Nishio; Yuko Yoshikawa; Naoki Umezawa; Tsunehiko Higuchi; Chwen-Yang Shew; Takahiro Kenmotsu; Kenichi Yoshikawa
Journal:  Int J Mol Sci       Date:  2021-02-26       Impact factor: 5.923

9.  On the Biology of Werner's Complex.

Authors:  Raphael E F de Paiva; Erica J Peterson; Jaroslav Malina; Mary Zoepfl; J David Hampton; Wyatt E Johnson; Angelica Graminha; Amine Ourahmane; Michael A McVoy; Viktor Brabec; Susan J Berners-Price; Nicholas P Farrell
Journal:  Angew Chem Int Ed Engl       Date:  2021-06-27       Impact factor: 16.823

10.  Opposite effect of polyamines on In vitro gene expression: Enhancement at low concentrations but inhibition at high concentrations.

Authors:  Ai Kanemura; Yuko Yoshikawa; Wakao Fukuda; Kanta Tsumoto; Takahiro Kenmotsu; Kenichi Yoshikawa
Journal:  PLoS One       Date:  2018-03-01       Impact factor: 3.240

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