Literature DB >> 16143880

Community phylogenetic diversity of cyanobacterial mats associated with geothermal springs along a tropical intertidal gradient.

Hongmei Jing1, Donnabella C Lacap, Chui Yim Lau, Stephen B Pointing.   

Abstract

The 16S rRNA gene-defined bacterial diversity of tropical intertidal geothermal vents subject to varying degrees of seawater inundation was investigated. Shannon-Weaver diversity estimates of clone library-derived sequences revealed that the hottest pools located above the mean high-water mark that did not experience seawater inundation were most diverse, followed by those that were permanently submerged below the mean low-water mark. Pools located in the intertidal were the least biodiverse, and this is attributed to the fluctuating conditions caused by periodic seawater inundation rather than physicochemical conditions per se. Phylogenetic analysis revealed that a ubiquitous Oscillatoria-like phylotype accounted for 83% of clones. Synechococcus-like phylotypes were also encountered at each location, whilst others belonging to the Chroococcales, Oscillatoriales, and other non-phototrophic bacteria occurred only at specific locations along the gradient. All cyanobacterial phylotypes displayed highest phylogenetic affinity to terrestrial thermophilic counterparts rather than marine taxa.

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Year:  2005        PMID: 16143880     DOI: 10.1007/s00792-005-0477-9

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  5 in total

1.  Enrichment culture and microscopy conceal diverse thermophilic Synechococcus populations in a single hot spring microbial mat habitat.

Authors:  M J Ferris; A L Ruff-Roberts; E D Kopczynski; M M Bateson; D M Ward
Journal:  Appl Environ Microbiol       Date:  1996-03       Impact factor: 4.792

2.  Investigation of the microbial ecology of intertidal hot springs by using diversity analysis of 16S rRNA and chitinase genes.

Authors:  Cédric F V Hobel; Viggó T Marteinsson; Gudmundur O Hreggvidsson; Jakob K Kristjánsson
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

3.  Community phylogenetic analysis of moderately thermophilic cyanobacterial mats from China, the Philippines and Thailand.

Authors:  Jing Hongmei; Jonathan C Aitchison; Donnabella C Lacap; Yuwadee Peerapornpisal; Udomluk Sompong; Stephen B Pointing
Journal:  Extremophiles       Date:  2005-06-22       Impact factor: 2.395

Review 4.  A natural view of microbial biodiversity within hot spring cyanobacterial mat communities.

Authors:  D M Ward; M J Ferris; S C Nold; M M Bateson
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

5.  PCR primers to amplify 16S rRNA genes from cyanobacteria.

Authors:  U Nübel; F Garcia-Pichel; G Muyzer
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

  5 in total
  5 in total

1.  Microbial community analysis of a coastal hot spring in Kagoshima, Japan, using molecular- and culture-based approaches.

Authors:  Minako Nishiyama; Shuichi Yamamoto; Norio Kurosawa
Journal:  J Microbiol       Date:  2013-08-30       Impact factor: 3.422

2.  Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet.

Authors:  Subramanya Rao; Olivia W Chan; Donnabella C Lacap-Bugler; Stephen B Pointing
Journal:  Indian J Microbiol       Date:  2016-06-16       Impact factor: 2.461

3.  Vertical partitioning and expression of primary metabolic genes in a thermophilic microbial mat.

Authors:  Maggie C Y Lau; Stephen B Pointing
Journal:  Extremophiles       Date:  2009-04-04       Impact factor: 2.395

4.  Bacterial community composition in thermophilic microbial mats from five hot springs in central Tibet.

Authors:  Maggie C Y Lau; Jonathan C Aitchison; Stephen B Pointing
Journal:  Extremophiles       Date:  2008-11-21       Impact factor: 2.395

5.  The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone National Park.

Authors:  Eric D Becraft; Jason M Wood; Douglas B Rusch; Michael Kühl; Sheila I Jensen; Donald A Bryant; David W Roberts; Frederick M Cohan; David M Ward
Journal:  Front Microbiol       Date:  2015-06-22       Impact factor: 5.640

  5 in total

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