Literature DB >> 1613792

Three-dimensional structure of a recombinant variant of human pancreatic secretory trypsin inhibitor (Kazal type).

H J Hecht1, M Szardenings, J Collins, D Schomburg.   

Abstract

A modified version of the human pancreatic trypsin inhibitor (PSTI), generated in a protein-design project, has been crystallized in spacegroup P4(3) with lattice constants a = 40.15 A, c = 33.91 A. The structure has been solved by molecular replacement. Refinement of the structure by simulated annealing and conventional restrained least-squares yielded for 8.0 to 2.3 A data a final R-value of 19.1%. Differences to the known structures of porcine PSTI complexed with trypsinogen and modified human PSTI complexed with chymotrypsinogen occur at the flexible N-terminal part of the molecule. These differences are influenced by crystal packing, as are low temperature factors for the binding loop. The geometry of the binding loop is similar to the complexed structures.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1613792     DOI: 10.1016/0022-2836(92)90107-u

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  7 in total

1.  PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta.

Authors:  Sidhartha Chaudhury; Sergey Lyskov; Jeffrey J Gray
Journal:  Bioinformatics       Date:  2010-01-07       Impact factor: 6.937

2.  PeptiSite: a structural database of peptide binding sites in 4D.

Authors:  Chayan Acharya; Irina Kufareva; Andrey V Ilatovskiy; Ruben Abagyan
Journal:  Biochem Biophys Res Commun       Date:  2014-01-06       Impact factor: 3.575

3.  Missense mutations in pancreatic secretory trypsin inhibitor (SPINK1) cause intracellular retention and degradation.

Authors:  Orsolya Király; Thomas Wartmann; Miklós Sahin-Tóth
Journal:  Gut       Date:  2007-05-24       Impact factor: 23.059

4.  Molecular dynamics simulations reveal structural instability of human trypsin inhibitor upon D50E and Y54H mutations.

Authors:  Wanwimon Mokmak; Surasak Chunsrivirot; Anunchai Assawamakin; Kiattawee Choowongkomon; Sissades Tongsima
Journal:  J Mol Model       Date:  2012-09-07       Impact factor: 1.810

5.  Predicting the reactivity of proteins from their sequence alone: Kazal family of protein inhibitors of serine proteinases.

Authors:  S M Lu; W Lu; M A Qasim; S Anderson; I Apostol; W Ardelt; T Bigler; Y W Chiang; J Cook; M N James; I Kato; C Kelly; W Kohr; T Komiyama; T Y Lin; M Ogawa; J Otlewski; S J Park; S Qasim; M Ranjbar; M Tashiro; N Warne; H Whatley; A Wieczorek; M Wieczorek; T Wilusz; R Wynn; W Zhang; M Laskowski
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-06       Impact factor: 11.205

6.  SnapDock-template-based docking by Geometric Hashing.

Authors:  Michael Estrin; Haim J Wolfson
Journal:  Bioinformatics       Date:  2017-07-15       Impact factor: 6.937

7.  The impact of physiological stress conditions on protein structure and trypsin inhibition of serine protease inhibitor Kazal type 1 (SPINK1) and its N34S variant.

Authors:  Ina Buchholz; Felix Nagel; Annelie Klein; Preshit R Wagh; Ujjwal M Mahajan; Andreas Greinacher; Markus M Lerch; Julia Mayerle; Mihaela Delcea
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2019-09-13       Impact factor: 3.036

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.