Literature DB >> 16133102

The active component in the flax-retting system of the zygomycete Rhizopus oryzae sb is a family 28 polygalacturonase.

Jing Zhang1, Hongbin Henriksson, Istvan J Szabo, Gunnar Henriksson, Gunnar Johansson.   

Abstract

The zygomycete Rhizopus oryzae sb is a very efficient organism for retting of flax, the initial microbiological step in the process of making linen. An extracellular polygalacturonase, when isolated could perform retting, and therefore probably is the key component in the retting system of R. oryzae. This was purified and characterized. The purified enzyme has a molecular mass of 37,436 Da from mass spectrometric determination, an isoelectric point of 8.4, and has non-methylated polygalacturonic acid as its preferred substrate. Peptide sequences indicate that the enzyme belongs to family 28, in similarity with other polygalacturonases (EC. 3.2.1.15). It contains, however an N-terminal sequence absent in other fungal pectinases, but present in an enzyme from the phytopathogenic bacterium Ralstonia solanacearum. The biochemical background for the superior retting efficiency of R. oryzae sb is discussed.

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Year:  2005        PMID: 16133102     DOI: 10.1007/s10295-005-0014-y

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  13 in total

1.  Polygalacturonase is the key component in enzymatic retting of flax.

Authors:  J Zhang; G Henriksson; G Johansson
Journal:  J Biotechnol       Date:  2000-07-28       Impact factor: 3.307

2.  SIMULTANEOUS PRODUCTION AND SYNERGISTIC ACTION OF OXALIC ACID AND POLYGALACTURONASE DURING PATHOGENESIS BY SCLEROTIUM ROLFSII.

Authors:  D F BATEMAN; S V BEER
Journal:  Phytopathology       Date:  1965-02       Impact factor: 4.025

3.  In-gel digestion of proteins for internal sequence analysis after one- or two-dimensional gel electrophoresis.

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Journal:  Anal Biochem       Date:  1992-05-15       Impact factor: 3.365

4.  DNA sequence analysis of pglA and mechanism of export of its polygalacturonase product from Pseudomonas solanacearum.

Authors:  J H Huang; M A Schell
Journal:  J Bacteriol       Date:  1990-07       Impact factor: 3.490

5.  Induction of polygalacturonase and the formation of oxalic acid by pectin in brown-rot fungi.

Authors:  F Green; C A Clausen; T A Kuster; T L Highley
Journal:  World J Microbiol Biotechnol       Date:  1995-09       Impact factor: 3.312

6.  Improvement of an "In-Gel" digestion procedure for the micropreparation of internal protein fragments for amino acid sequencing.

Authors:  U Hellman; C Wernstedt; J Góñez; C H Heldin
Journal:  Anal Biochem       Date:  1995-01-01       Impact factor: 3.365

Review 7.  Pectin, pectinase and protopectinase: production, properties, and applications.

Authors:  T Sakai; T Sakamoto; J Hallaert; E J Vandamme
Journal:  Adv Appl Microbiol       Date:  1993       Impact factor: 5.086

8.  Gel protein stains: silver stain.

Authors:  C R Merril; D Goldman; M L Van Keuren
Journal:  Methods Enzymol       Date:  1984       Impact factor: 1.600

9.  Analysis of conformational states of Candida rugosa lipase in solution: implications for mechanism of interfacial activation and separation of open and closed forms.

Authors:  N A Turner; E C Needs; J A Khan; E N Vulfson
Journal:  Biotechnol Bioeng       Date:  2001-01-05       Impact factor: 4.530

10.  Purification of the extracellular pectinolytic enzyme from the fungus Rhizopus oryzae NBRC 4707.

Authors:  Katsuichi Saito; Naoya Takakuwa; Yuji Oda
Journal:  Microbiol Res       Date:  2004       Impact factor: 5.415

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  5 in total

1.  Purification, characterization and retting of Crotolaria juncea fibres by an alkaline pectin lyase from Fusarium oxysporum MTCC 1755.

Authors:  S Yadav; S K Maurya; G Anand; R Dwivedi; D Yadav
Journal:  3 Biotech       Date:  2017-06-08       Impact factor: 2.406

2.  Expression and characterization of fifteen Rhizopus oryzae 99-880 polygalacturonase enzymes in Pichia pastoris.

Authors:  Jeffrey A Mertens; Michael J Bowman
Journal:  Curr Microbiol       Date:  2010-12-15       Impact factor: 2.188

3.  Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level.

Authors:  Evy Battaglia; Isabelle Benoit; Joost van den Brink; Ad Wiebenga; Pedro M Coutinho; Bernard Henrissat; Ronald P de Vries
Journal:  BMC Genomics       Date:  2011-01-17       Impact factor: 3.969

4.  Purification and characterization of polygalacturonase from Aspergillus fumigatus MTCC 2584 and elucidating its application in retting of Crotalaria juncea fiber.

Authors:  Gautam Anand; Sangeeta Yadav; Dinesh Yadav
Journal:  3 Biotech       Date:  2016-09-22       Impact factor: 2.406

5.  Characterization of Bacterial and Fungal Community Dynamics by High-Throughput Sequencing (HTS) Metabarcoding during Flax Dew-Retting.

Authors:  Christophe Djemiel; Sébastien Grec; Simon Hawkins
Journal:  Front Microbiol       Date:  2017-10-20       Impact factor: 5.640

  5 in total

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