Literature DB >> 16132815

Human subtelomere structure and variation.

H Riethman1, A Ambrosini, S Paul.   

Abstract

Work towards completion of the human reference genome sequence has revealed a great deal of complexity and plasticity in human subtelomeric regions. The highly variable subtelomeric repeat regions are filled with recently shuffled genomic segments, many of which contain sequences matching transcripts and transcript fragments; the rapid duplication and combinatorial evolution of these regions has generated an extremely diverse set of subtelomeric alleles in the human species, the complexity and potential significance of which is only beginning to be understood. This review summarizes recent progress in analyzing human subtelomeric sequence assemblies and large-scale variation in human subtelomere regions.

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Year:  2005        PMID： 16132815     DOI： 10.1007/s10577-005-0998-1

Source DB:  PubMed          Journal:  Chromosome Res        ISSN： 0967-3849            Impact factor:   5.239


  49 in total

1.  Integration of telomere sequences with the draft human genome sequence.

Authors:  H C Riethman; Z Xiang; S Paul; E Morse; X L Hu; J Flint; H C Chi; D L Grady; R K Moyzis
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  The evolutionary origin of human subtelomeric homologies--or where the ends begin.

Authors:  Christa Lese Martin; Andrew Wong; Alyssa Gross; June Chung; Judy A Fantes; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2002-03-01       Impact factor: 11.025

3.  Recent segmental duplications in the human genome.

Authors:  Jeffrey A Bailey; Zhiping Gu; Royden A Clark; Knut Reinert; Rhea V Samonte; Stuart Schwartz; Mark D Adams; Eugene W Myers; Peter W Li; Evan E Eichler
Journal:  Science       Date:  2002-08-09       Impact factor: 47.728

4.  The shortest telomeres drive karyotype evolution in transformed cells.

Authors:  Héra der-Sarkissian; Silvia Bacchetti; Lucien Cazes; José Arturo Londoño-Vallejo
Journal:  Oncogene       Date:  2004-02-12       Impact factor: 9.867

5.  The relative lengths of individual telomeres are defined in the zygote and strictly maintained during life.

Authors:  Jesper Graakjaer; Leigh Pascoe; Héra Der-Sarkissian; Gilles Thomas; Steen Kolvraa; Kaare Christensen; José-Arturo Londoño-Vallejo
Journal:  Aging Cell       Date:  2004-06       Impact factor: 9.304

6.  Sequence comparison of human and yeast telomeres identifies structurally distinct subtelomeric domains.

Authors:  J Flint; G P Bates; K Clark; A Dorman; D Willingham; B A Roe; G Micklem; D R Higgs; E J Louis
Journal:  Hum Mol Genet       Date:  1997-08       Impact factor: 6.150

7.  Telomerase-dependent repeat divergence at the 3' ends of yeast telomeres.

Authors:  K Förstemann; M Höss; J Lingner
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

8.  Segmental polymorphisms in the proterminal regions of a subset of human chromosomes.

Authors:  Hera Der-Sarkissian; Gilles Vergnaud; Yves-Marie Borde; Gilles Thomas; José-Arturo Londoño-Vallejo
Journal:  Genome Res       Date:  2002-11       Impact factor: 9.043

9.  Distribution of intrachromosomal telomeric sequences (ITS) on Macaca fascicularis (Primates) chromosomes and their implication for chromosome evolution.

Authors:  A Ruiz-Herrera; F García; C Azzalin; E Giulotto; J Egozcue; M Ponsà; M Garcia
Journal:  Hum Genet       Date:  2002-05-04       Impact factor: 4.132

Review 10.  Growth, telomere dynamics and successful and unsuccessful human aging.

Authors:  Abraham Aviv; Daniel Levy; Marc Mangel
Journal:  Mech Ageing Dev       Date:  2003-07       Impact factor: 5.432
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  53 in total

Review 1.  Telomere dynamics: the means to an end.

Authors:  M Matulić; M Sopta; I Rubelj
Journal:  Cell Prolif       Date:  2007-08       Impact factor: 6.831

2.  Simple telomeres in a simple animal: absence of subtelomeric repeat regions in the placozoan Trichoplax adhaerens.

Authors:  Hugh M Robertson
Journal:  Genetics       Date:  2008-11-03       Impact factor: 4.562

3.  A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.

Authors:  Zhong Deng; Zhuo Wang; Nick Stong; Robert Plasschaert; Aliah Moczan; Horng-Shen Chen; Sufeng Hu; Priyankara Wikramasinghe; Ramana V Davuluri; Marisa S Bartolomei; Harold Riethman; Paul M Lieberman
Journal:  EMBO J       Date:  2012-09-25       Impact factor: 11.598

4.  Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals.

Authors:  Ines Hellmann; Yuan Mang; Zhiping Gu; Peter Li; Francisco M de la Vega; Andrew G Clark; Rasmus Nielsen
Journal:  Genome Res       Date:  2008-04-14       Impact factor: 9.043

5.  The choanoflagellate Monosiga brevicollis karyotype revealed by the genome sequence: telomere-linked helicase genes resemble those of some fungi.

Authors:  Hugh M Robertson
Journal:  Chromosome Res       Date:  2009-09-30       Impact factor: 5.239

6.  Copy number variation and selection during reprogramming to pluripotency.

Authors:  Samer M Hussein; Nizar N Batada; Sanna Vuoristo; Reagan W Ching; Reija Autio; Elisa Närvä; Siemon Ng; Michel Sourour; Riikka Hämäläinen; Cia Olsson; Karolina Lundin; Milla Mikkola; Ras Trokovic; Michael Peitz; Oliver Brüstle; David P Bazett-Jones; Kari Alitalo; Riitta Lahesmaa; Andras Nagy; Timo Otonkoski
Journal:  Nature       Date:  2011-03-03       Impact factor: 49.962

7.  Duplication of the Miller-Dieker Critical Region in a Patient with a Subtelomeric Unbalanced Translocation t(10;17)(p15.3;p13.3).

Authors:  R Ruiz Esparza-Garrido; A C Velázquez-Wong; M A Araujo-Solís; J C Huicochea-Montiel; M Á Velázquez-Flores; F Salamanca-Gómez; D J Arenas-Aranda
Journal:  Mol Syndromol       Date:  2012-07-10

8.  Identification of chromosome abnormalities in subtelomeric regions by microarray analysis: a study of 5,380 cases.

Authors:  Lina Shao; Chad A Shaw; Xin-Yan Lu; Trilochan Sahoo; Carlos A Bacino; Seema R Lalani; Pawel Stankiewicz; Svetlana A Yatsenko; Yinfeng Li; Sarah Neill; Amber N Pursley; A Craig Chinault; Ankita Patel; Arthur L Beaudet; James R Lupski; Sau W Cheung
Journal:  Am J Med Genet A       Date:  2008-09-01       Impact factor: 2.802

9.  Subtelomeric p53 binding prevents accumulation of DNA damage at human telomeres.

Authors:  Stephen Tutton; Greggory A Azzam; Nicholas Stong; Olga Vladimirova; Andreas Wiedmer; Jessica A Monteith; Kate Beishline; Zhuo Wang; Zhong Deng; Harold Riethman; Steven B McMahon; Maureen Murphy; Paul M Lieberman
Journal:  EMBO J       Date:  2015-12-12       Impact factor: 11.598

10.  DDX11L: a novel transcript family emerging from human subtelomeric regions.

Authors:  Valerio Costa; Amelia Casamassimi; Roberta Roberto; Fernando Gianfrancesco; Maria R Matarazzo; Michele D'Urso; Maurizio D'Esposito; Mariano Rocchi; Alfredo Ciccodicola
Journal:  BMC Genomics       Date:  2009-05-28       Impact factor: 3.969
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