Literature DB >> 16128569

Agonists and partial agonists of rhodopsin: retinals with ring modifications.

Reiner Vogel1, Friedrich Siebert, Steffen Lüdeke, Amiram Hirshfeld, Mordechai Sheves.   

Abstract

Activation of the visual pigment rhodopsin is initiated by isomerization of its retinal chromophore to the all-trans geometry, which drives the conformation of the protein to the active state. We have examined by FTIR spectroscopy the impact of a series of modifications at the ring of retinal on the activation process and on molecular interactions within the binding pocket. Deletion of ring methyl groups at C1 and C5 or replacement of the ring in diethyl or ethyl-methyl acyclic analogues resulted in partial agonists, for which the conformational equilibrium between the Meta I and Meta II photoproduct is shifted from the active Meta II side to the inactive Meta I side. While the Meta II states of these artificial pigments had a conformation similar to those of native Meta II, the Meta I states were different. Modifications on the ring of retinal had a particular impact on the interaction of Glu 122 within the ring-binding pocket and are shown to interfere with the Glu 134-mediated proton uptake during formation of Meta II. We further found, upon partial deletion of ring constituents, a decrease of the entropy change of the transition from Meta I to Meta II by up to 50%, while the concomitant reduction of the enthalpy term was less pronounced. These findings underline the particular importance of the ring and the ring methyl groups and are discussed in a model of receptor activation.

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Year:  2005        PMID: 16128569     DOI: 10.1021/bi0508587

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  How a small change in retinal leads to G-protein activation: initial events suggested by molecular dynamics calculations.

Authors:  Paul S Crozier; Mark J Stevens; Thomas B Woolf
Journal:  Proteins       Date:  2007-02-15

2.  SPECTRAL METHODS FOR STUDY OF THE G-PROTEIN-COUPLED RECEPTOR RHODOPSIN. I. VIBRATIONAL AND ELECTRONIC SPECTROSCOPY.

Authors:  A V Struts; A V Barmasov; M F Brown
Journal:  Opt Spectrosc       Date:  2015-05-27       Impact factor: 0.891

Review 3.  Solid-state 2H NMR spectroscopy of retinal proteins in aligned membranes.

Authors:  Michael F Brown; Maarten P Heyn; Constantin Job; Suhkmann Kim; Stephan Moltke; Koji Nakanishi; Alexander A Nevzorov; Andrey V Struts; Gilmar F J Salgado; Ingrid Wallat
Journal:  Biochim Biophys Acta       Date:  2007-10-23

4.  Tracking G-protein-coupled receptor activation using genetically encoded infrared probes.

Authors:  Shixin Ye; Ekaterina Zaitseva; Gianluigi Caltabiano; Gebhard F X Schertler; Thomas P Sakmar; Xavier Deupi; Reiner Vogel
Journal:  Nature       Date:  2010-04-11       Impact factor: 49.962

5.  Specificity of the chromophore-binding site in human cone opsins.

Authors:  Kota Katayama; Sahil Gulati; Joseph T Ortega; Nathan S Alexander; Wenyu Sun; Marina M Shenouda; Krzysztof Palczewski; Beata Jastrzebska
Journal:  J Biol Chem       Date:  2019-02-15       Impact factor: 5.157

6.  Location of the retinal chromophore in the activated state of rhodopsin*.

Authors:  Shivani Ahuja; Evan Crocker; Markus Eilers; Viktor Hornak; Amiram Hirshfeld; Martine Ziliox; Natalie Syrett; Philip J Reeves; H Gobind Khorana; Mordechai Sheves; Steven O Smith
Journal:  J Biol Chem       Date:  2009-01-28       Impact factor: 5.157

7.  Dynamic structure of retinylidene ligand of rhodopsin probed by molecular simulations.

Authors:  Pick-Wei Lau; Alan Grossfield; Scott E Feller; Michael C Pitman; Michael F Brown
Journal:  J Mol Biol       Date:  2007-06-26       Impact factor: 5.469

8.  Light activation of rhodopsin: insights from molecular dynamics simulations guided by solid-state NMR distance restraints.

Authors:  Viktor Hornak; Shivani Ahuja; Markus Eilers; Joseph A Goncalves; Mordechai Sheves; Philip J Reeves; Steven O Smith
Journal:  J Mol Biol       Date:  2009-12-11       Impact factor: 5.469

9.  Two protonation switches control rhodopsin activation in membranes.

Authors:  Mohana Mahalingam; Karina Martínez-Mayorga; Michael F Brown; Reiner Vogel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-07       Impact factor: 11.205

Review 10.  Retinal dynamics during light activation of rhodopsin revealed by solid-state NMR spectroscopy.

Authors:  Michael F Brown; Gilmar F J Salgado; Andrey V Struts
Journal:  Biochim Biophys Acta       Date:  2009-08-28
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