Literature DB >> 16126485

Is there or isn't there? The case for (and against) residual structure in chemically denatured proteins.

Evan R McCarney1, Jonathan E Kohn, Kevin W Plaxco.   

Abstract

First raised some 60 years ago, the question of whether chemically denatured proteins are fully unfolded has, in recent years, seen significantly renewed interest. This increased attention has been spurred, in large part, by new spectroscopic and computational approaches that suggest even the most highly denatured polypeptides contain significant residual structure. In contrast, the most recent scattering results uphold the long-standing view that chemically denatured proteins adopt random coil configurations. Here we review the evidence both for and against residual structure in chemically denatured proteins, and attempt to reconcile these seemingly contradictory observations.

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Year:  2005        PMID: 16126485     DOI: 10.1080/10409230591008143

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  44 in total

1.  Stochastic simulation of structural properties of natively unfolded and denatured proteins.

Authors:  David Curcó; Catherine Michaux; Guillaume Roussel; Emmanuel Tinti; Eric A Perpète; Carlos Alemán
Journal:  J Mol Model       Date:  2012-05-29       Impact factor: 1.810

2.  Contribution of long-range interactions to the secondary structure of an unfolded globin.

Authors:  Daria V Fedyukina; Senapathy Rajagopalan; Ashok Sekhar; Eric C Fulmer; Ye-Jin Eun; Silvia Cavagnero
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

3.  Small-angle X-ray scattering and single-molecule FRET spectroscopy produce highly divergent views of the low-denaturant unfolded state.

Authors:  Tae Yeon Yoo; Steve P Meisburger; James Hinshaw; Lois Pollack; Gilad Haran; Tobin R Sosnick; Kevin Plaxco
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

4.  Insights into Unfolded Proteins from the Intrinsic ϕ/ψ Propensities of the AAXAA Host-Guest Series.

Authors:  Clare-Louise Towse; Jiri Vymetal; Jiri Vondrasek; Valerie Daggett
Journal:  Biophys J       Date:  2016-01-19       Impact factor: 4.033

5.  Organization and dynamics of tryptophan residues in brain spectrin: novel insight into conformational flexibility.

Authors:  Madhurima Mitra; Arunima Chaudhuri; Malay Patra; Chaitali Mukhopadhyay; Abhijit Chakrabarti; Amitabha Chattopadhyay
Journal:  J Fluoresc       Date:  2015-04-03       Impact factor: 2.217

6.  Modulating native-like residual structure in the fully denatured state of photoactive yellow protein affects its refolding.

Authors:  Byoung-Chul Lee; Masato Kumauchi; Wouter D Hoff
Journal:  J Biol Chem       Date:  2010-02-23       Impact factor: 5.157

7.  Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions.

Authors:  Hoang T Tran; Rohit V Pappu
Journal:  Biophys J       Date:  2006-06-09       Impact factor: 4.033

8.  Urea-induced unfolding of the immunity protein Im9 monitored by spFRET.

Authors:  Tomoko Tezuka-Kawakami; Chris Gell; David J Brockwell; Sheena E Radford; D Alastair Smith
Journal:  Biophys J       Date:  2006-06-23       Impact factor: 4.033

9.  Small-angle X-ray scattering of reduced ribonuclease A: effects of solution conditions and comparisons with a computational model of unfolded proteins.

Authors:  Yuanyuan Wang; Jill Trewhella; David P Goldenberg
Journal:  J Mol Biol       Date:  2008-02-14       Impact factor: 5.469

Review 10.  Combining experiment and simulation in protein folding: closing the gap for small model systems.

Authors:  R Dustin Schaeffer; Alan Fersht; Valerie Daggett
Journal:  Curr Opin Struct Biol       Date:  2008-02-01       Impact factor: 6.809

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