Literature DB >> 16123114

PAWE-3D: visualizing power for association with error in case-control genetic studies of complex traits.

Derek Gordon1, Chad Haynes, Jon Blumenfeld, Stephen J Finch.   

Abstract

UNLABELLED: A website that plots power and sample size calculations over a range of up to eight parameters (including diagnostic misclassification error parameters) for two commonly used statistical tests of genetic association, the linear trend test and the genotypic test of association. AVAILABILITY: This method is made available via the website http://linkage.rockefeller.edu/pawe3d/ CONTACT: pawe3d@linkage.rockefeller.edu.

Mesh：

Year:  2005        PMID： 16123114     DOI： 10.1093/bioinformatics/bti643

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  16 in total

1.  The -590C/TIL4 single-nucleotide polymorphism as a genetic factor of atopic allergy.

Authors:  Roldan M de Guia; John Donnie A Ramos
Journal:  Int J Mol Epidemiol Genet       Date:  2009-11-25

2.  An Analytic Solution to the Computation of Power and Sample Size for Genetic Association Studies under a Pleiotropic Mode of Inheritance.

Authors:  Derek Gordon; Douglas Londono; Payal Patel; Wonkuk Kim; Stephen J Finch; Gary A Heiman
Journal:  Hum Hered       Date:  2017-03-18       Impact factor: 0.444

3.  Genetic susceptibility to chronic otitis media with effusion: candidate gene single nucleotide polymorphisms.

Authors:  Carol J MacArthur; Beth Wilmot; Linda Wang; Michael Schuller; Jessyka Lighthall; Dennis Trune
Journal:  Laryngoscope       Date:  2013-10-02       Impact factor: 3.325

4.  Genome-wide association studies of adolescent idiopathic scoliosis suggest candidate susceptibility genes.

Authors:  Swarkar Sharma; Xiaochong Gao; Douglas Londono; Shonn E Devroy; Kristen N Mauldin; Jessica T Frankel; January M Brandon; Dongping Zhang; Quan-Zhen Li; Matthew B Dobbs; Christina A Gurnett; Struan F A Grant; Hakon Hakonarson; John P Dormans; John A Herring; Derek Gordon; Carol A Wise
Journal:  Hum Mol Genet       Date:  2011-01-07       Impact factor: 6.150

5.  Imaging genetics of FOXP2 in dyslexia.

Authors:  Arndt Wilcke; Carolin Ligges; Jana Burkhardt; Michael Alexander; Christiane Wolf; Elfi Quente; Peter Ahnert; Per Hoffmann; Albert Becker; Bertram Müller-Myhsok; Sven Cichon; Johannes Boltze; Holger Kirsten
Journal:  Eur J Hum Genet       Date:  2011-09-07       Impact factor: 4.246

6.  Catechol-O-methyltransferase (COMT) gene variants: possible association of the Val158Met variant with opiate addiction in Hispanic women.

Authors:  Bronson E Oosterhuis; K Steven LaForge; Dmitri Proudnikov; Ann Ho; David A Nielsen; Robert Gianotti; Sandra Barral; Derek Gordon; Suzanne M Leal; Jurg Ott; Mary Jeanne Kreek
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2008-09-05       Impact factor: 3.568

7.  Single-variant and multi-variant trend tests for genetic association with next-generation sequencing that are robust to sequencing error.

Authors:  Wonkuk Kim; Douglas Londono; Lisheng Zhou; Jinchuan Xing; Alejandro Q Nato; Anthony Musolf; Tara C Matise; Stephen J Finch; Derek Gordon
Journal:  Hum Hered       Date:  2013-04-11       Impact factor: 0.444

Review 8.  Sources of bias in genomics research of oral and dental traits.

Authors:  C S Agler; K Divaris
Journal:  Community Dent Health       Date:  2020-02-27       Impact factor: 1.349

9.  Testing for linkage and association across the dihydrolipoyl dehydrogenase gene region with Alzheimer's disease in three sample populations.

Authors:  Abraham M Brown; Derek Gordon; Hsinhwa Lee; Fabienne Wavrant-De Vrièze; Elena Cellini; Silvia Bagnoli; Benedetta Nacmias; Sandro Sorbi; John Hardy; John P Blass
Journal:  Neurochem Res       Date:  2007-03-07       Impact factor: 3.996

10.  SORL1 is genetically associated with late-onset Alzheimer's disease in Japanese, Koreans and Caucasians.

Authors:  Akinori Miyashita; Asako Koike; Gyungah Jun; Li-San Wang; Satoshi Takahashi; Etsuro Matsubara; Takeshi Kawarabayashi; Mikio Shoji; Naoki Tomita; Hiroyuki Arai; Takashi Asada; Yasuo Harigaya; Masaki Ikeda; Masakuni Amari; Haruo Hanyu; Susumu Higuchi; Takeshi Ikeuchi; Masatoyo Nishizawa; Masaichi Suga; Yasuhiro Kawase; Hiroyasu Akatsu; Kenji Kosaka; Takayuki Yamamoto; Masaki Imagawa; Tsuyoshi Hamaguchi; Masahito Yamada; Takashi Morihara; Takashi Moriaha; Masatoshi Takeda; Takeo Takao; Kenji Nakata; Yoshikatsu Fujisawa; Ken Sasaki; Ken Watanabe; Kenji Nakashima; Katsuya Urakami; Terumi Ooya; Mitsuo Takahashi; Takefumi Yuzuriha; Kayoko Serikawa; Seishi Yoshimoto; Ryuji Nakagawa; Jong-Won Kim; Chang-Seok Ki; Hong-Hee Won; Duk L Na; Sang Won Seo; Inhee Mook-Jung; Peter St George-Hyslop; Richard Mayeux; Jonathan L Haines; Margaret A Pericak-Vance; Makiko Yoshida; Nao Nishida; Katsushi Tokunaga; Ken Yamamoto; Shoji Tsuji; Ichiro Kanazawa; Yasuo Ihara; Gerard D Schellenberg; Lindsay A Farrer; Ryozo Kuwano
Journal:  PLoS One       Date:  2013-04-02       Impact factor: 3.240
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