Literature DB >> 16121571

A re-consideration of Pseudoperonospora cubensis and P. humuli based on molecular and morphological data.

Young-Joon Choi1, Seung-Beom Hong, Hyeon-Dong Shin.   

Abstract

Phylogenetic analysis of the ITS rDNA region was carried out with two economically important downy mildews, Pseudoperonospora cubensis, which infects species of Cucumis, Cucurbita, and Citrullus belonging to Cucurbitaceae, and P. humuli, which infects plants of the genus Humulus belonging to Cannabaceae. Two closely related species, P. cannabina and P. celtidis, were also included to reveal taxonomic relationships with the first two mildews. All four species formed a well-resolved clade when compared with the ITS sequences of other downy mildew genera, using Bayesian inference and maximum parsimony. The P. cubensis isolates obtained from different hosts and (or) geographical origins in Korea, exhibited no intraspecific variability in the ITS sequences. The phylogenetic analyses of P. cubensis and P. humuli showed that they share a high level of sequence homology; the morphology of the sporangiophores, sporangia, and dehiscence apparatus confirmed the similarity of the two species. We therefore reduce P. humuli to the status of a taxonomic synonym of P. cubensis.

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Year:  2005        PMID: 16121571     DOI: 10.1017/s0953756205002534

Source DB:  PubMed          Journal:  Mycol Res        ISSN: 0953-7562


  11 in total

1.  Morphological and molecular analyses support the existence of host-specific Peronospora species infecting Chenopodium.

Authors:  Young-Joon Choi; Cvetomir M Denchev; Hyeon-Dong Shin
Journal:  Mycopathologia       Date:  2008-02-13       Impact factor: 2.574

Review 2.  The cucurbit downy mildew pathogen Pseudoperonospora cubensis.

Authors:  Elizabeth A Savory; Leah L Granke; Lina M Quesada-Ocampo; Marina Varbanova; Mary K Hausbeck; Brad Day
Journal:  Mol Plant Pathol       Date:  2010-11-10       Impact factor: 5.663

3.  Multi-locus tree and species tree approaches toward resolving a complex clade of downy mildews (Straminipila, Oomycota), including pathogens of beet and spinach.

Authors:  Young-Joon Choi; Steven J Klosterman; Volker Kummer; Hermann Voglmayr; Hyeon-Dong Shin; Marco Thines
Journal:  Mol Phylogenet Evol       Date:  2015-03-12       Impact factor: 4.286

4.  Which morphological characteristics are most influenced by the host matrix in downy mildews? A case study in Pseudoperonospora cubensis.

Authors:  Fabian Runge; Beninweck Ndambi; Marco Thines
Journal:  PLoS One       Date:  2012-11-15       Impact factor: 3.240

5.  mRNA-Seq analysis of the Pseudoperonospora cubensis transcriptome during cucumber (Cucumis sativus L.) infection.

Authors:  Elizabeth A Savory; Bishwo N Adhikari; John P Hamilton; Brieanne Vaillancourt; C Robin Buell; Brad Day
Journal:  PLoS One       Date:  2012-04-24       Impact factor: 3.240

6.  Analysis of microsatellites from the transcriptome of downy mildew pathogens and their application for characterization of Pseudoperonospora populations.

Authors:  Emma C Wallace; Lina M Quesada-Ocampo
Journal:  PeerJ       Date:  2017-05-02       Impact factor: 2.984

7.  Molecular taxonomy of phytopathogenic fungi: a case study in Peronospora.

Authors:  Markus Göker; Gema García-Blázquez; Hermann Voglmayr; M Teresa Tellería; María P Martín
Journal:  PLoS One       Date:  2009-07-29       Impact factor: 3.240

8.  Identification of Genetic Variation between Obligate Plant Pathogens Pseudoperonospora cubensis and P. humuli Using RNA Sequencing and Genotyping-By-Sequencing.

Authors:  Carly F Summers; Colwyn M Gulliford; Craig H Carlson; Jacquelyn A Lillis; Maryn O Carlson; Lance Cadle-Davidson; David H Gent; Christine D Smart
Journal:  PLoS One       Date:  2015-11-23       Impact factor: 3.240

9.  Resurgence of cucurbit downy mildew in the United States: Insights from comparative genomic analysis of Pseudoperonospora cubensis.

Authors:  Anna Thomas; Ignazio Carbone; Kisurb Choe; Lina M Quesada-Ocampo; Peter S Ojiambo
Journal:  Ecol Evol       Date:  2017-07-03       Impact factor: 2.912

10.  "Jumping Jack": Genomic Microsatellites Underscore the Distinctiveness of Closely Related Pseudoperonospora cubensis and Pseudoperonospora humuli and Provide New Insights Into Their Evolutionary Past.

Authors:  Marcin Nowicki; Denita Hadziabdic; Robert N Trigiano; Sarah L Boggess; Loukas Kanetis; Phillip A Wadl; Peter S Ojiambo; Marc A Cubeta; Otmar Spring; Marco Thines; Fabian Runge; Brian E Scheffler
Journal:  Front Microbiol       Date:  2021-07-14       Impact factor: 5.640

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