Literature DB >> 16113115

Plasticity of acetylcholine receptor gating motions via rate-energy relationships.

Ananya Mitra1, Richard Tascione, Anthony Auerbach, Stuart Licht.   

Abstract

Like other protein conformational changes, ion channel gating requires the protein to achieve a high-energy transition-state structure. It is not known whether ion channel gating takes place on a broad energy landscape on which many alternative transition state structures are accessible, or on a narrow energy landscape where only a few transition-state structures are possible. To address this question, we measured how rate-equilibrium free energy relationships (REFERs) for di-liganded and unliganded acetylcholine receptor gating vary as a function of the gating equilibrium constant. A large slope for the REFER plot indicates an openlike transition state, whereas a small slope indicates a closedlike transition state. Due to this relationship between REFERs and transition-state structure, the sensitivity of the REFER slope to mutation-induced energetic perturbations allows estimation of the breadth of the energy landscape underlying gating. The relatively large sensitivity of di-liganded REFER slopes to energetic perturbations suggests that the motions underlying di-liganded gating take place on a broad, shallow energy landscape where many alternative transition-state structures are accessible.

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Year:  2005        PMID: 16113115      PMCID: PMC1366804          DOI: 10.1529/biophysj.105.068783

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  35 in total

1.  A direct optimization approach to hidden Markov modeling for single channel kinetics.

Authors:  F Qin; A Auerbach; F Sachs
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Authors: 
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3.  The open pore conformation of potassium channels.

Authors:  Youxing Jiang; Alice Lee; Jiayun Chen; Martine Cadene; Brian T Chait; Roderick MacKinnon
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4.  Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins.

Authors:  O Miyashita; J N Onuchic; P G Wolynes
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5.  Free-energy landscapes of ion-channel gating are malleable: changes in the number of bound ligands are accompanied by changes in the location of the transition state in acetylcholine-receptor channels.

Authors:  Claudio Grosman
Journal:  Biochemistry       Date:  2003-12-23       Impact factor: 3.162

Review 6.  Toward a structural basis for the function of nicotinic acetylcholine receptors and their cousins.

Authors:  A Karlin; M H Akabas
Journal:  Neuron       Date:  1995-12       Impact factor: 17.173

7.  The channel opening rate of adult- and fetal-type mouse muscle nicotinic receptors activated by acetylcholine.

Authors:  D J Maconochie; J H Steinbach
Journal:  J Physiol       Date:  1998-01-01       Impact factor: 5.182

8.  Congenital myasthenic syndrome caused by decreased agonist binding affinity due to a mutation in the acetylcholine receptor epsilon subunit.

Authors:  K Ohno; H L Wang; M Milone; N Bren; J M Brengman; S Nakano; P Quiram; J N Pruitt; S M Sine; A G Engel
Journal:  Neuron       Date:  1996-07       Impact factor: 17.173

9.  Structure and gating mechanism of the acetylcholine receptor pore.

Authors:  Atsuo Miyazawa; Yoshinori Fujiyoshi; Nigel Unwin
Journal:  Nature       Date:  2003-06-26       Impact factor: 49.962

10.  Gating dynamics of the acetylcholine receptor extracellular domain.

Authors:  Sudha Chakrapani; Timothy D Bailey; Anthony Auerbach
Journal:  J Gen Physiol       Date:  2004-04       Impact factor: 4.086

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  12 in total

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2.  Unliganded gating of acetylcholine receptor channels.

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3.  Temperature dependence of acetylcholine receptor channels activated by different agonists.

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Journal:  Biophys J       Date:  2011-02-16       Impact factor: 4.033

Review 4.  The energy and work of a ligand-gated ion channel.

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Journal:  J Mol Biol       Date:  2013-01-25       Impact factor: 5.469

5.  Functional anatomy of an allosteric protein.

Authors:  Prasad Purohit; Shaweta Gupta; Snehal Jadey; Anthony Auerbach
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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7.  Conformational plasticity of the influenza A M2 transmembrane helix in lipid bilayers under varying pH, drug binding, and membrane thickness.

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8.  A residue at the cytoplasmic entrance of BK-type channels regulating single-channel opening by its hydrophobicity.

Authors:  Zhaohua Guo; Caixia Lv; Hong Yi; Yu Xiong; Yingliang Wu; Wenxin Li; Tao Xu; Jiuping Ding
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9.  Phenylalanine-508 mediates a cytoplasmic-membrane domain contact in the CFTR 3D structure crucial to assembly and channel function.

Authors:  Adrian W R Serohijos; Tamás Hegedus; Andrei A Aleksandrov; Lihua He; Liying Cui; Nikolay V Dokholyan; John R Riordan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-27       Impact factor: 11.205

10.  Application of rate-equilibrium free energy relationship analysis to nonequilibrium ion channel gating mechanisms.

Authors:  László Csanády
Journal:  J Gen Physiol       Date:  2009-08       Impact factor: 4.086

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