Literature DB >> 16109956

Effects of nitrogen and carbon sources on transcription of soluble methyltransferases in Methanosarcina mazei strain Go1.

Katharina Veit1, Claudia Ehlers, Ruth A Schmitz.   

Abstract

The methanogenic archaeon Methanosarcina mazei strain Gö1 uses versatile carbon sources and is able to fix molecular nitrogen with methanol as carbon and energy sources. Here, we demonstrate that when growing on trimethylamine (TMA), nitrogen fixation does not occur, indicating that ammonium released during TMA degradation is sufficient to serve as a nitrogen source and represses nif gene induction. We further report on the transcriptional regulation of soluble methyltransferases, which catalyze the initial step of methylamine consumption by methanogenesis, in response to different carbon and nitrogen sources. Unexpectedly, we obtained conclusive evidence that transcription of the mtmB2C2 operon, encoding a monomethylamine (MMA) methyltransferase and its corresponding corrinoid protein, is highly increased under nitrogen limitation when methanol serves as a carbon source. In contrast, transcription of the homologous mtmB1C1 operon is not affected by the nitrogen source but appears to be increased when TMA is the sole carbon and energy source. In general, transcription of operons encoding dimethylamine (DMA) and TMA methyltransferases and methylcobalamine:coenzyme M methyltransferases is not regulated in response to the nitrogen source. However, in all cases transcription of one of the homologous operons or genes is increased by TMA or its degradation products DMA and MMA.

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Year:  2005        PMID: 16109956      PMCID: PMC1196137          DOI: 10.1128/JB.187.17.6147-6154.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  21 in total

Review 1.  Biochemistry of methanogenesis: a tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture.

Authors:  Rudolf K Thauer
Journal:  Microbiology (Reading)       Date:  1998-09       Impact factor: 2.777

2.  Functional organization of a single nif cluster in the mesophilic archaeon Methanosarcina mazei strain Gö1.

Authors:  Claudia Ehlers; Katharina Veit; Gerhard Gottschalk; Ruth A Schmitz
Journal:  Archaea       Date:  2002-09       Impact factor: 3.273

3.  Utilization of trimethylamine and other N-methyl compounds for growth and methane formation by Methanosarcina barkeri.

Authors:  H Hippe; D Caspari; K Fiebig; G Gottschalk
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

4.  DNA microarray analysis of Methanosarcina mazei Gö1 reveals adaptation to different methanogenic substrates.

Authors:  Raymond Hovey; Sabine Lentes; Armin Ehrenreich; Kirsty Salmon; Karla Saba; Gerhard Gottschalk; Robert P Gunsalus; Uwe Deppenmeier
Journal:  Mol Genet Genomics       Date:  2005-04-07       Impact factor: 3.291

5.  Reconstitution of trimethylamine-dependent coenzyme M methylation with the trimethylamine corrinoid protein and the isozymes of methyltransferase II from Methanosarcina barkeri.

Authors:  D J Ferguson; J A Krzycki
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

6.  Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA.

Authors:  Gayathri Srinivasan; Carey M James; Joseph A Krzycki
Journal:  Science       Date:  2002-05-24       Impact factor: 47.728

7.  Reduced coenzyme F420: heterodisulfide oxidoreductase, a proton- translocating redox system in methanogenic bacteria.

Authors:  U Deppenmeier; M Blaut; A Mahlmann; G Gottschalk
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12-01       Impact factor: 11.205

8.  The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea.

Authors:  Uwe Deppenmeier; Andre Johann; Thomas Hartsch; Rainer Merkl; Ruth A Schmitz; Rosa Martinez-Arias; Anke Henne; Arnim Wiezer; Sebastian Bäumer; Carsten Jacobi; Holger Brüggemann; Tanja Lienard; Andreas Christmann; Mechthild Bömeke; Silke Steckel; Anamitra Bhattacharyya; Athanasios Lykidis; Ross Overbeek; Hans-Peter Klenk; Robert P Gunsalus; Hans-Joachim Fritz; Gerhard Gottschalk
Journal:  J Mol Microbiol Biotechnol       Date:  2002-07

9.  Direct charging of tRNA(CUA) with pyrrolysine in vitro and in vivo.

Authors:  Sherry K Blight; Ross C Larue; Anirban Mahapatra; David G Longstaff; Edward Chang; Gang Zhao; Patrick T Kang; Kari B Green-Church; Michael K Chan; Joseph A Krzycki
Journal:  Nature       Date:  2004-08-25       Impact factor: 49.962

10.  Specific roles of methylcobamide:coenzyme M methyltransferase isozymes in metabolism of methanol and methylamines in Methanosarcina barkeri.

Authors:  D J Ferguson; J A Krzycki; D A Grahame
Journal:  J Biol Chem       Date:  1996-03-01       Impact factor: 5.157

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  16 in total

1.  Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities.

Authors:  Katharina Veit; Claudia Ehlers; Armin Ehrenreich; Kirsty Salmon; Raymond Hovey; Robert P Gunsalus; Uwe Deppenmeier; Ruth A Schmitz
Journal:  Mol Genet Genomics       Date:  2006-04-20       Impact factor: 3.291

2.  Reducing the genetic code induces massive rearrangement of the proteome.

Authors:  Patrick O'Donoghue; Laure Prat; Martin Kucklick; Johannes G Schäfer; Katharina Riedel; Jesse Rinehart; Dieter Söll; Ilka U Heinemann
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-17       Impact factor: 11.205

3.  Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability.

Authors:  Dominik Jäger; Cynthia M Sharma; Jens Thomsen; Claudia Ehlers; Jörg Vogel; Ruth A Schmitz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-08       Impact factor: 11.205

4.  Methanosarcina Spherical Virus, a Novel Archaeal Lytic Virus Targeting Methanosarcina Strains.

Authors:  Katrin Weidenbach; Lisa Nickel; Horst Neve; Omer S Alkhnbashi; Sven Künzel; Anne Kupczok; Thorsten Bauersachs; Liam Cassidy; Andreas Tholey; Rolf Backofen; Ruth A Schmitz
Journal:  J Virol       Date:  2017-10-27       Impact factor: 5.103

5.  sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1.

Authors:  Daniela Prasse; Konrad U Förstner; Dominik Jäger; Rolf Backofen; Ruth A Schmitz
Journal:  RNA Biol       Date:  2017-04-27       Impact factor: 4.652

6.  The appearance of pyrrolysine in tRNAHis guanylyltransferase by neutral evolution.

Authors:  Ilka U Heinemann; Patrick O'Donoghue; Catherine Madinger; Jack Benner; Lennart Randau; Christopher J Noren; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-24       Impact factor: 11.205

7.  Two CRISPR-Cas systems in Methanosarcina mazei strain Gö1 display common processing features despite belonging to different types I and III.

Authors:  Lisa Nickel; Katrin Weidenbach; Dominik Jäger; Rolf Backofen; Sita J Lange; Nadja Heidrich; Ruth A Schmitz
Journal:  RNA Biol       Date:  2013-04-25       Impact factor: 4.652

Review 8.  Selenocysteine, pyrrolysine, and the unique energy metabolism of methanogenic archaea.

Authors:  Michael Rother; Joseph A Krzycki
Journal:  Archaea       Date:  2010-08-17       Impact factor: 3.273

9.  The ether-cleaving methyltransferase system of the strict anaerobe Acetobacterium dehalogenans: analysis and expression of the encoding genes.

Authors:  Anke Schilhabel; Sandra Studenik; Martin Vödisch; Sandra Kreher; Bernhard Schlott; Antonio J Pierik; Antonio Y Pierik; Gabriele Diekert
Journal:  J Bacteriol       Date:  2008-11-14       Impact factor: 3.490

10.  Carbon source-dependent expansion of the genetic code in bacteria.

Authors:  Laure Prat; Ilka U Heinemann; Hans R Aerni; Jesse Rinehart; Patrick O'Donoghue; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

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