Literature DB >> 16109948

MtdC, a novel class of methylene tetrahydromethanopterin dehydrogenases.

Julia A Vorholt1, Marina G Kalyuzhnaya, Christoph H Hagemeier, Mary E Lidstrom, Ludmila Chistoserdova.   

Abstract

Novel methylene tetrahydromethanopterin (H4MPT) dehydrogenase enzymes, named MtdC, were purified after expressing in Escherichia coli genes from, respectively, Gemmata sp. strain Wa1-1 and environmental DNA originating from unidentified microbial species. The MtdC enzymes were shown to possess high affinities for methylene-H4MPT and NADP but low affinities for methylene tetrahydrofolate or NAD. The substrate range and the kinetic properties revealed by MtdC enzymes distinguish them from the previously characterized bacterial methylene-H4MPT dehydrogenases, MtdA and MtdB. While revealing higher sequence similarity to MtdA enzymes, MtdC enzymes appear to fulfill a function homologous to the function of MtdB, as part of the H4MPT-linked pathway for formaldehyde oxidation/detoxification.

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Year:  2005        PMID: 16109948      PMCID: PMC1196156          DOI: 10.1128/JB.187.17.6069-6074.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  30 in total

Review 1.  Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view.

Authors:  Ludmila Chistoserdova; Sung-Wei Chen; Alla Lapidus; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

2.  Purification and characterization of the methylene tetrahydromethanopterin dehydrogenase MtdB and the methylene tetrahydrofolate dehydrogenase FolD from Hyphomicrobium zavarzinii ZV580.

Authors:  Meike Goenrich; Jan Bursy; Eva Hübner; Dietmar Linder; Arnold C Schwartz; Julia A Vorholt
Journal:  Arch Microbiol       Date:  2002-01-31       Impact factor: 2.552

3.  Development of improved versatile broad-host-range vectors for use in methylotrophs and other Gram-negative bacteria.

Authors:  Christopher J Marx; Mary E Lidstrom
Journal:  Microbiology       Date:  2001-08       Impact factor: 2.777

4.  Characterization of a second methylene tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1.

Authors:  C H Hagemeier; L Chistoserdova; M E Lidstrom; R K Thauer; J A Vorholt
Journal:  Eur J Biochem       Date:  2000-06

5.  Novel formaldehyde-activating enzyme in Methylobacterium extorquens AM1 required for growth on methanol.

Authors:  J A Vorholt; C J Marx; M E Lidstrom; R K Thauer
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

6.  Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.

Authors:  Ulrich Ermler; Christoph H Hagemeier; Annette Roth; Ulrike Demmer; Wolfgang Grabarse; Eberhard Warkentin; Julia A Vorholt
Journal:  Structure       Date:  2002-08       Impact factor: 5.006

Review 7.  Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria.

Authors:  Julia A Vorholt
Journal:  Arch Microbiol       Date:  2002-07-05       Impact factor: 2.552

8.  Dichloromethane metabolism and C1 utilization genes in Methylobacterium strains.

Authors:  Martin F Kayser; Zöhre Ucurum; Stéphane Vuilleumier
Journal:  Microbiology       Date:  2002-06       Impact factor: 2.777

9.  Complete genome sequence of the marine planctomycete Pirellula sp. strain 1.

Authors:  F O Glöckner; M Kube; M Bauer; H Teeling; T Lombardot; W Ludwig; D Gade; A Beck; K Borzym; K Heitmann; R Rabus; H Schlesner; R Amann; R Reinhardt
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-30       Impact factor: 12.779

10.  Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath).

Authors:  Naomi Ward; Øivind Larsen; James Sakwa; Live Bruseth; Hoda Khouri; A Scott Durkin; George Dimitrov; Lingxia Jiang; David Scanlan; Katherine H Kang; Matt Lewis; Karen E Nelson; Barbara Methé; Martin Wu; John F Heidelberg; Ian T Paulsen; Derrick Fouts; Jacques Ravel; Hervé Tettelin; Qinghu Ren; Tim Read; Robert T DeBoy; Rekha Seshadri; Steven L Salzberg; Harald B Jensen; Nils Kåre Birkeland; William C Nelson; Robert J Dodson; Svenn H Grindhaug; Ingeborg Holt; Ingvar Eidhammer; Inge Jonasen; Susan Vanaken; Terry Utterback; Tamara V Feldblyum; Claire M Fraser; Johan R Lillehaug; Jonathan A Eisen
Journal:  PLoS Biol       Date:  2004-09-21       Impact factor: 8.029

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  6 in total

1.  Highly divergent genes for methanopterin-linked C1 transfer reactions in Lake Washington, assessed via metagenomic analysis and mRNA detection.

Authors:  Marina G Kalyuzhnaya; Sarah Bowerman; Olivier Nercessian; Mary E Lidstrom; Ludmila Chistoserdova
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

Review 2.  Beating the acetyl coenzyme A-pathway to the origin of life.

Authors:  Wolfgang Nitschke; Michael J Russell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-06-10       Impact factor: 6.237

Review 3.  Physiology, Biochemistry, and Applications of F420- and Fo-Dependent Redox Reactions.

Authors:  Chris Greening; F Hafna Ahmed; A Elaaf Mohamed; Brendon M Lee; Gunjan Pandey; Andrew C Warden; Colin Scott; John G Oakeshott; Matthew C Taylor; Colin J Jackson
Journal:  Microbiol Mol Biol Rev       Date:  2016-04-27       Impact factor: 11.056

4.  Evaluating the Evolutionary Origins of Unexpected Character Distributions within the Bacterial Planctomycetes-Verrucomicrobia-Chlamydiae Superphylum.

Authors:  A Budd; D P Devos
Journal:  Front Microbiol       Date:  2012-11-23       Impact factor: 5.640

5.  Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis.

Authors:  Jay W Kim; Susan H Brawley; Simon Prochnik; Mansi Chovatia; Jane Grimwood; Jerry Jenkins; Kurt LaButti; Konstantinos Mavromatis; Matt Nolan; Matthew Zane; Jeremy Schmutz; John W Stiller; Arthur R Grossman
Journal:  PLoS One       Date:  2016-03-25       Impact factor: 3.240

6.  Evolution in action: habitat transition from sediment to the pelagial leads to genome streamlining in Methylophilaceae.

Authors:  Michaela M Salcher; Daniel Schaefle; Melissa Kaspar; Stefan M Neuenschwander; Rohit Ghai
Journal:  ISME J       Date:  2019-07-10       Impact factor: 10.302

  6 in total

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