Literature DB >> 16108667

A molecular dynamics study of nitric oxide in water: diffusion and structure.

Zhongwu Zhou1, B D Todd, Karl P Travis, Richard J Sadus.   

Abstract

We present molecular dynamics simulations of the diffusion coefficients and structure of water-nitric oxide mixtures at ambient (298 K) and in vivo (310 K) conditions. A two-site rigid-body molecular model with partial charges and a Lennard-Jones potential on both sites is proposed for nitric oxide and used in conjunction with the extended simple point-charge model for liquid water in our simulations. The diffusion coefficients obtained from the simulations are in good agreement with experimental data. The results from intermolecular partial pair functions show that under these thermodynamic conditions, the existence of nitric oxide in liquid water has little impact on the structure of water and the tendency to form H bonds between water molecules. We also find that it is unlikely that H bonds form between the hydrogen atoms in water and either the nitrogen or the oxygen atom on the nitric oxide at the temperatures and densities examined in this study. This study suggests that in low concentrations nitric oxide molecules exist as free molecules in liquid water rather than forming complexes with water molecules.

Entities:  

Year:  2005        PMID: 16108667     DOI: 10.1063/1.1992482

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Computational study of the interaction between NO, NO+, and NO- with H2O.

Authors:  Renato P Orenha; Letícia R San Gregorio; Sérgio E Galembeck
Journal:  J Mol Model       Date:  2016-10-26       Impact factor: 1.810

2.  Can metal ion complexes be used as polarizing agents for solution DNP? A theoretical discussion.

Authors:  Claudio Luchinat; Giacomo Parigi; Enrico Ravera
Journal:  J Biomol NMR       Date:  2013-04-20       Impact factor: 2.835

  2 in total

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