Literature DB >> 1610821

Biphasic effects of alcohols on the phase transition of poly(L-lysine) between alpha-helix and beta-sheet conformations.

A Shibata1, M Yamamoto, T Yamashita, J S Chiou, H Kamaya, I Ueda.   

Abstract

Poly(L-lysine) exists as a random-coil at neutral pH, an alpha-helix at alkaline pH, and a beta-sheet when the alpha-helix poly(L-lysine) is heated. The present Fourier-transform infrared (FTIR) study showed that short-chain alcohols (methanol, ethanol, and 2-propanol) partially transformed alpha-helix poly(L-lysine) to beta-sheet when their concentrations were low. At higher concentrations, however, these alcohols reversed the reaction, and the alcohol-induced beta-sheet was transformed back to alpha-helix structure. The reversal occurred at 1.40 M methanol, 0.96 M ethanol, and 0.55 M 2-propanol. The alcohol effects on the secondary structure were further investigated by circular dichroism (CD) on the thermally induced beta-sheet poly(L-lysine). Methanol, ethanol, and 1-propanol, but not 1-butanol, shifted the negative mean-residue ellipticity at 217 nm of the beta-sheet poly(L-lysine) to the positive side at low concentrations of the alcohols and to the negative side at high concentrations. With 1-butanol, only the positive-side shift was observed. The positive-side shift at low concentrations of alcohols indicates enhancement of the hydrophobic interactions among the side chains of the polypeptide in the beta-sheet conformation. The negative-side shift indicates a partial transformation to alpha-helix. The shift from the positive to negative side occurred at 7.1 M methanol, 4.6 M ethanol, and 3.1 M 1-propanol. The alcohol concentrations for the beta-to-alpha transition were higher in the CD study than in the IR study.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1992        PMID: 1610821     DOI: 10.1021/bi00140a006

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Polyproline II helical structure in protein unfolded states: lysine peptides revisited.

Authors:  Adam L Rucker; Trevor P Creamer
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

2.  Conformational sampling of peptides in cellular environments.

Authors:  Seiichiro Tanizaki; Jacob Clifford; Brian D Connelly; Michael Feig
Journal:  Biophys J       Date:  2007-09-28       Impact factor: 4.033

3.  Conformational sampling of peptides in the presence of protein crowders from AA/CG-multiscale simulations.

Authors:  Alexander V Predeus; Seref Gul; Srinivasa M Gopal; Michael Feig
Journal:  J Phys Chem B       Date:  2012-04-05       Impact factor: 2.991

4.  Alcohol-induced conformational transitions in ervatamin C. An alpha-helix to beta-sheet switchover.

Authors:  M Sundd; S Kundu; M V Jagannadham
Journal:  J Protein Chem       Date:  2000-04

5.  Conformationally driven protease-catalyzed splicing of peptide segments: V8 protease-mediated synthesis of fragments derived from thermolysin and ribonuclease A.

Authors:  S Kumaran; D Datta; R P Roy
Journal:  Protein Sci       Date:  1997-10       Impact factor: 6.725

  5 in total

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