Literature DB >> 16104996

Virulence Searcher: a tool for searching raw genome sequences from bacterial genomes for putative virulence factors.

A P Underwood1, A Mulder, S Gharbia, J Green.   

Abstract

There is often a delay between completion of a genome sequence and its publication, mainly because of the lengthy process of annotation. For most researchers, the raw sequence alone does not easily yield the rich information it contains. An online tool (Virulence Searcher) has been designed that enables scientists interested in bacterial pathogenesis to search sequences from unannotated bacterial genomes for putative genes encoding virulence factors. This will facilitate an immediate start on important research into bacterial disease without having to wait for the annotated sequence to be published.

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Year:  2005        PMID: 16104996     DOI: 10.1111/j.1469-0691.2005.01210.x

Source DB:  PubMed          Journal:  Clin Microbiol Infect        ISSN: 1198-743X            Impact factor:   8.067


  7 in total

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Journal:  Front Microbiol       Date:  2022-06-09       Impact factor: 6.064

2.  The genome of a pathogenic rhodococcus: cooptive virulence underpinned by key gene acquisitions.

Authors:  Michal Letek; Patricia González; Iain Macarthur; Héctor Rodríguez; Tom C Freeman; Ana Valero-Rello; Mónica Blanco; Tom Buckley; Inna Cherevach; Ruth Fahey; Alexia Hapeshi; Jolyon Holdstock; Desmond Leadon; Jesús Navas; Alain Ocampo; Michael A Quail; Mandy Sanders; Mariela M Scortti; John F Prescott; Ursula Fogarty; Wim G Meijer; Julian Parkhill; Stephen D Bentley; José A Vázquez-Boland
Journal:  PLoS Genet       Date:  2010-09-30       Impact factor: 5.917

3.  Towards pathogenomics: a web-based resource for pathogenicity islands.

Authors:  Sung Ho Yoon; Young-Kyu Park; Soohyun Lee; Doil Choi; Tae Kwang Oh; Cheol-Goo Hur; Jihyun F Kim
Journal:  Nucleic Acids Res       Date:  2006-11-07       Impact factor: 16.971

4.  Small Myristoylated Protein-3, Identified as a Potential Virulence Factor in Leishmania amazonensis, Proves to be a Protective Antigen against Visceral Leishmaniasis.

Authors:  Marcelo P Oliveira; Vívian T Martins; Thaís T O Santos; Daniela P Lage; Fernanda F Ramos; Beatriz C S Salles; Lourena E Costa; Daniel S Dias; Patrícia A F Ribeiro; Mônica S Schneider; Ricardo A Machado-de-Ávila; Antônio L Teixeira; Eduardo A F Coelho; Miguel A Chávez-Fumagalli
Journal:  Int J Mol Sci       Date:  2018-01-03       Impact factor: 5.923

5.  Identification of Streptococcus mitis321A vaccine antigens based on reverse vaccinology.

Authors:  Qiao Zhang; Kexiong Lin; Changzheng Wang; Zhi Xu; Li Yang; Qianli Ma
Journal:  Mol Med Rep       Date:  2018-03-28       Impact factor: 2.952

6.  Isolation and Characterization of Specific Phages to Prepare a Cocktail Preventing Vibrio sp. Va-F3 Infections in Shrimp (Litopenaeus vannamei).

Authors:  Ling Chen; Jiqiang Fan; Tingwei Yan; Quan Liu; Shengjian Yuan; Haoran Zhang; Jinfang Yang; Deng Deng; Shuqiang Huang; Yingfei Ma
Journal:  Front Microbiol       Date:  2019-10-11       Impact factor: 5.640

7.  The Novel Enterococcus Phage vB_EfaS_HEf13 Has Broad Lytic Activity Against Clinical Isolates of Enterococcus faecalis.

Authors:  Dongwook Lee; Jintaek Im; Hongjun Na; Sangryeol Ryu; Cheol-Heui Yun; Seung Hyun Han
Journal:  Front Microbiol       Date:  2019-12-17       Impact factor: 5.640

  7 in total

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