Literature DB >> 16103776

Identification of unique B/C recombinant strains of HIV-1 in the southern state of Karnataka, India.

Nagadenahalli Byrareddy Siddappa1, Prashanta Kumar Dash, Anita Mahadevan, Anita Desai, Narayana Jayasuryan, Vasanthapuram Ravi, Parthasarathy Satishchandra, Susarla K Shankar, Udaykumar Ranga.   

Abstract

We characterized the molecular nature of a large number of primary HIV-1 isolates in the four southern states of India. In addition to confirming a predominance of subtype C infection, for the first time we identified three B/C recombinant viruses in a subset of 115 samples. Unexpectedly, env sequences of two of the three B/C recombinants phylogenetically clustered with subtype B strains of the USA. The determination of the real incidence of the recombinant viruses is of importance.

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Year:  2005        PMID： 16103776     DOI： 10.1097/01.aids.0000180795.49016.89

Source DB:  PubMed          Journal:  AIDS        ISSN： 0269-9370            Impact factor:   4.177


  16 in total

1.  Genetic characterization of HIV type 1 Tat exon 1 from a southern Indian clinical cohort: identification of unique epidemiological signature residues.

Authors:  Ujjwal Neogi; Soham Gupta; Pravat Nalini Sahoo; Anita Shet; Shwetha D Rao; Udaykumar Ranga; Vinayaka R Prasad
Journal:  AIDS Res Hum Retroviruses       Date:  2012-05-02       Impact factor: 2.205

2.  Molecular characterization of unique intersubtype HIV type 1 A1/C recombinant strain circulating in Pune, India.

Authors:  Sudhanshu Pandey; Srikanth Tripathy; Ramesh Paranjape
Journal:  AIDS Res Hum Retroviruses       Date:  2013-07-19       Impact factor: 2.205

3.  Genetic diversity and proviral DNA load in different neural compartments of HIV-1 subtype C infection.

Authors:  Mamata Mishra; Rebu K Varghese; Anjali Verma; Sutanuka Das; Renato Santana Aguiar; Amilcar Tanuri; Anita Mahadevan; Susarla K Shankar; Parthasarathy Satishchandra; Udaykumar Ranga
Journal:  J Neurovirol       Date:  2015-03-07       Impact factor: 2.643

4.  Sequence insertions in the HIV type 1 subtype C viral promoter predominantly generate an additional NF-κB binding site.

Authors:  Mahesh Bachu; Anil Babu Mukthey; Rajesh V Murali; Narayanaiah Cheedarla; Anita Mahadevan; Susarla K Shankar; Kadappa S Satish; Tapas K Kundu; Udaykumar Ranga
Journal:  AIDS Res Hum Retroviruses       Date:  2012-03-23       Impact factor: 2.205

5.  Functional Incompatibility between the Generic NF-κB Motif and a Subtype-Specific Sp1III Element Drives the Formation of the HIV-1 Subtype C Viral Promoter.

Authors:  Anjali Verma; Pavithra Rajagopalan; Rishikesh Lotke; Rebu Varghese; Deepak Selvam; Tapas K Kundu; Udaykumar Ranga
Journal:  J Virol       Date:  2016-07-27       Impact factor: 5.103

Review 6.  HIV infection in India: epidemiology, molecular epidemiology and pathogenesis.

Authors:  Samir Lakhashe; Madhuri Thakar; Sheela Godbole; Srikanth Tripathy; Ramesh Paranjape
Journal:  J Biosci       Date:  2008-11       Impact factor: 1.826

7.  PTAP motif duplication in the p6 Gag protein confers a replication advantage on HIV-1 subtype C.

Authors:  Shilpee Sharma; Prabhu S Arunachalam; Malini Menon; Viswanath Ragupathy; Ravi Vijaya Satya; Joshua Jebaraj; Shambhu Ganeshappa Aralaguppe; Chaitra Rao; Sreshtha Pal; Shanmugam Saravanan; Kailapuri G Murugavel; Pachamuthu Balakrishnan; Suniti Solomon; Indira Hewlett; Udaykumar Ranga
Journal:  J Biol Chem       Date:  2018-05-17       Impact factor: 5.157

8.  Evolution of HIV-1 in India.

Authors:  Pradeep Seth
Journal:  Indian J Virol       Date:  2010-09-22

9.  Multiple NF-κB sites in HIV-1 subtype C long terminal repeat confer superior magnitude of transcription and thereby the enhanced viral predominance.

Authors:  Mahesh Bachu; Swarupa Yalla; Mangaiarkarasi Asokan; Anjali Verma; Ujjwal Neogi; Shilpee Sharma; Rajesh V Murali; Anil Babu Mukthey; Raghavendra Bhatt; Snehajyoti Chatterjee; Roshan Elizabeth Rajan; Narayana Cheedarla; Venkat S Yadavalli; Anita Mahadevan; Susarla K Shankar; Nirmala Rajagopalan; Anita Shet; Shanmugam Saravanan; Pachamuthu Balakrishnan; Suniti Solomon; Madhu Vajpayee; Kadappa Shivappa Satish; Tapas K Kundu; Kuan-Teh Jeang; Udaykumar Ranga
Journal:  J Biol Chem       Date:  2012-11-06       Impact factor: 5.157

10.  Molecular epidemiology of HIV-1 subtypes in India: origin and evolutionary history of the predominant subtype C.

Authors:  Ujjwal Neogi; Irene Bontell; Anita Shet; Ayesha De Costa; Soham Gupta; Vishal Diwan; Ranbir S Laishram; Ajay Wanchu; Udaykumar Ranga; Akhil C Banerjea; Anders Sönnerborg
Journal:  PLoS One       Date:  2012-06-29       Impact factor: 3.240
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