Literature DB >> 16101789

Barcoding generalist predators by polymerase chain reaction: carabids and spiders.

M H Greenstone1, D L Rowley, U Heimbach, J G Lundgren, R S Pfannenstiel, S A Rehner.   

Abstract

Identification of arthropod predators is challenging when closely related species are found at a given locality. Identification of the immature stages is especially problematic, because distinguishing morphological features are difficult to use or have not been described. We used polymerase chain reaction (PCR) to distinguish closely related carabids and spiders, and to match eggs and larvae (or nymphs) with identified adult parents. Within the Carabidae, we amplified species-specific mitochondrial cytochrome oxidase I (COI) fragments for three species each in the genera Poecilus and Harpalus, and two each in Chlaenius and Bembidion. Within the Araneae, we amplified species-specific COI fragments for two Hibana species (Anyphaenidae), Pardosa milvina and Rabidosa rabida (Lycosidae), Frontinella communis and Grammonota texana (Linyphiidae), and Cheiracanthium inclusum (Miturgidae). We are able to correctly identify all immature stages tested--eggs, larvae (or nymphs) and pupae--by comparison of the amplified fragments with those of the adults. Using COI markers as species identifiers is a tenet of the Barcode of Life initiative, an international consortium to provide a molecular identifier for every animal species.

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Year:  2005        PMID: 16101789     DOI: 10.1111/j.1365-294X.2005.02628.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  17 in total

1.  Obtaining molecular data for all life stages of Typhlodromus (Typhlodromus) exhilaratus (Mesostigmata: Phytoseiidae): consequences for species identification.

Authors:  M Okassa; S Kreiter; M-S Tixier
Journal:  Exp Appl Acarol       Date:  2012-03-29       Impact factor: 2.132

2.  Using COI gene sequence to barcode two morphologically alike species: the cotton bollworm and the oriental tobacco budworm (Lepidoptera: Noctuidae).

Authors:  Qing-Qing Li; Di-Yan Li; Hui Ye; Xiao-Fei Liu; Wei Shi; Neng Cao; Yan-Qing Duan
Journal:  Mol Biol Rep       Date:  2010-12-23       Impact factor: 2.316

3.  Molecular classification of Pakistani collared dove through DNA barcoding.

Authors:  Ali Raza Awan; Emma Umar; Muhammad Zia ul Haq; Sehrish Firyal
Journal:  Mol Biol Rep       Date:  2013-09-26       Impact factor: 2.316

4.  "Crown of thorns" of Daphnia: an exceptional inducible defense discovered by DNA barcoding.

Authors:  Christian Laforsch; Andreas Haas; Nina Jung; Klaus Schwenk; Ralph Tollrian; Adam Petrusek
Journal:  Commun Integr Biol       Date:  2009-09

5.  Comparative performances of DNA barcoding across insect orders.

Authors:  Massimiliano Virgilio; Thierry Backeljau; Bruno Nevado; Marc De Meyer
Journal:  BMC Bioinformatics       Date:  2010-04-27       Impact factor: 3.169

6.  Mitochondrial heteroplasmy and DNA barcoding in Hawaiian Hylaeus (Nesoprosopis) bees (Hymenoptera: Colletidae).

Authors:  Karl N Magnacca; Mark J F Brown
Journal:  BMC Evol Biol       Date:  2010-06-11       Impact factor: 3.260

7.  Species identification of marine fishes in china with DNA barcoding.

Authors:  Junbin Zhang
Journal:  Evid Based Complement Alternat Med       Date:  2011-05-11       Impact factor: 2.629

8.  Molecular approach to the identification of fish in the South China Sea.

Authors:  Junbin Zhang; Robert Hanner
Journal:  PLoS One       Date:  2012-02-17       Impact factor: 3.240

9.  The complete genome sequence of a third distinct baculovirus isolated from the true armyworm, Mythimna unipuncta, contains two copies of the lef-7 gene.

Authors:  Robert L Harrison; Joseph D Mowery; Daniel L Rowley; Gary R Bauchan; David A Theilmann; George F Rohrmann; Martin A Erlandson
Journal:  Virus Genes       Date:  2017-12-04       Impact factor: 2.198

10.  Phylogenetic diversity (PD) and biodiversity conservation: some bioinformatics challenges.

Authors:  Daniel P Faith; Andrew M Baker
Journal:  Evol Bioinform Online       Date:  2007-02-17       Impact factor: 1.625

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