Literature DB >> 16099159

Genomic views of chromatin.

Dana J Huebert1, Bradley E Bernstein.   

Abstract

With the availability of complete genome sequences for a number of organisms, a major challenge has become to understand how chromatin and its epigenetic modifications regulate genome function. High-throughput microarray and sequencing technologies are being combined with biochemical and immunological enrichment methods to obtain genome-scale views of chromatin in a variety of organisms. The data pinpoint novel, genomic elements and expansive chromatin domains, and offer insight into the functions of histone modifications. In parallel, state-of-the-art imaging techniques are being used to investigate higher-order chromatin organization, and are beginning to bridge our understanding of chromatin biology with that of chromosome structure.

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Year:  2005        PMID: 16099159     DOI: 10.1016/j.gde.2005.08.001

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  13 in total

1.  H2AX chromatin structures and their response to DNA damage revealed by 4Pi microscopy.

Authors:  Jörg Bewersdorf; Brian T Bennett; Kendall L Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-16       Impact factor: 11.205

2.  Chromatin structure exhibits spatio-temporal heterogeneity within the cell nucleus.

Authors:  Bidisha Banerjee; Dipanjan Bhattacharya; G V Shivashankar
Journal:  Biophys J       Date:  2006-06-30       Impact factor: 4.033

3.  Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns.

Authors:  Tae-young Roh; Gang Wei; Catherine M Farrell; Keji Zhao
Journal:  Genome Res       Date:  2006-11-29       Impact factor: 9.043

4.  Histone acetylation at the human beta-globin locus changes with developmental age.

Authors:  Wenxuan Yin; Gráinne Barkess; Xiangdong Fang; Ping Xiang; Hua Cao; George Stamatoyannopoulos; Qiliang Li
Journal:  Blood       Date:  2007-09-19       Impact factor: 22.113

5.  Induction of the CTLA-4 gene in human lymphocytes is dependent on NFAT binding the proximal promoter.

Authors:  Heather M Gibson; Carrie J Hedgcock; Barbara M Aufiero; Adam J Wilson; Mikehl S Hafner; George C Tsokos; Henry K Wong
Journal:  J Immunol       Date:  2007-09-15       Impact factor: 5.422

6.  Histone acetylation and its role in embryonic stem cell differentiation.

Authors:  Naiara Z Saraiva; Clara S Oliveira; Joaquim M Garcia
Journal:  World J Stem Cells       Date:  2010-12-26       Impact factor: 5.326

7.  Histone H4 lysine 20 monomethylation promotes transcriptional repression by L3MBTL1.

Authors:  N Kalakonda; W Fischle; P Boccuni; N Gurvich; R Hoya-Arias; X Zhao; Y Miyata; D Macgrogan; J Zhang; J K Sims; J C Rice; S D Nimer
Journal:  Oncogene       Date:  2008-04-14       Impact factor: 9.867

8.  Maize histone deacetylase hda101 is involved in plant development, gene transcription, and sequence-specific modulation of histone modification of genes and repeats.

Authors:  Vincenzo Rossi; Sabrina Locatelli; Serena Varotto; Guenter Donn; Raul Pirona; David A Henderson; Hans Hartings; Mario Motto
Journal:  Plant Cell       Date:  2007-04-27       Impact factor: 11.277

9.  A functional link between rhythmic changes in chromatin structure and the Arabidopsis biological clock.

Authors:  Mariano Perales; Paloma Más
Journal:  Plant Cell       Date:  2007-07-06       Impact factor: 11.277

10.  Sequence-dependent variations associated with H2A/H2B depletion of nucleosomes.

Authors:  L Kelbauskas; N Chan; R Bash; P DeBartolo; J Sun; N Woodbury; D Lohr
Journal:  Biophys J       Date:  2007-10-12       Impact factor: 4.033

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