Literature DB >> 16096681

Evolutionary robustness of an optimal phenotype: re-evolution of lysis in a bacteriophage deleted for its lysin gene.

Richard H Heineman1, Ian J Molineux, James J Bull.   

Abstract

Optimality models are frequently used to create expectations about phenotypic evolution based on the fittest possible phenotype. However, they often ignore genetic details, which could confound these expectations. We experimentally analyzed the ability of organisms to evolve towards an optimum in an experimentally tractable system, lysis time in bacteriophage T7. T7 lysozyme helps lyse the host cell by degrading its cell wall at the end of infection, allowing viral escape to infect new hosts. Artificial deletion of lysozyme greatly reduced fitness and delayed lysis, but after evolution both phenotypes approached wild-type values. Phage with a lysis-deficient lysozyme evolved similarly. Several mutations were involved in adaptation, but most of the change in lysis timing and fitness increase was mediated by changes in gene 16, an internal virion protein not formerly considered to play a role in lysis. Its muralytic domain, which normally aids genome entry through the cell wall, evolved to cause phage release. Theoretical models suggest there is an optimal lysis time, and lysis more rapid or delayed than this optimum decreases fitness. Artificially constructed lines with very rapid lysis had lower fitness than wild-type T7, in accordance with the model. However, while a slow-lysing line also had lower fitness than wild-type, this low fitness resulted at least partly from genetic details that violated model assumptions.

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Year:  2005        PMID: 16096681     DOI: 10.1007/s00239-004-0304-4

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  41 in total

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Journal:  J Mol Biol       Date:  1975-07-25       Impact factor: 5.469

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Authors:  Michael Moak; Ian J Molineux
Journal:  Mol Microbiol       Date:  2004-02       Impact factor: 3.501

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Authors:  B A Moffatt; F W Studier
Journal:  Cell       Date:  1987-04-24       Impact factor: 41.582

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Authors:  X Cheng; X Zhang; J W Pflugrath; F W Studier
Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-26       Impact factor: 11.205

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Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

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Authors:  S H Kao; W H McClain
Journal:  J Virol       Date:  1980-04       Impact factor: 5.103

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Journal:  J Mol Biol       Date:  1966-07       Impact factor: 5.469

9.  Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability.

Authors:  Stephen T Abedon; Paul Hyman; Cameron Thomas
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

10.  Bacteriophage T7 DNA ejection into cells is initiated by an enzyme-like mechanism.

Authors:  Priscilla Kemp; Manisha Gupta; Ian J Molineux
Journal:  Mol Microbiol       Date:  2004-08       Impact factor: 3.501

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  23 in total

1.  Slow fitness recovery in a codon-modified viral genome.

Authors:  J J Bull; I J Molineux; C O Wilke
Journal:  Mol Biol Evol       Date:  2012-04-24       Impact factor: 16.240

2.  Multiple genetic pathways to similar fitness limits during viral adaptation to a new host.

Authors:  Andre H Nguyen; Ian J Molineux; Rachael Springman; James J Bull
Journal:  Evolution       Date:  2011-09-20       Impact factor: 3.694

3.  Accumulation of deleterious mutations in small abiotic populations of RNA.

Authors:  Steven J Soll; Carolina Díaz Arenas; Niles Lehman
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

4.  Lethal mutagenesis failure may augment viral adaptation.

Authors:  Matthew L Paff; Steven P Stolte; James J Bull
Journal:  Mol Biol Evol       Date:  2013-10-03       Impact factor: 16.240

5.  Lysis delay and burst shrinkage of coliphage T7 by deletion of terminator Tφ reversed by deletion of early genes.

Authors:  Huong Minh Nguyen; Changwon Kang
Journal:  J Virol       Date:  2013-12-11       Impact factor: 5.103

6.  The phenotype-fitness map in experimental evolution of phages.

Authors:  James J Bull; Richard H Heineman; Claus O Wilke
Journal:  PLoS One       Date:  2011-11-22       Impact factor: 3.240

7.  Multiple mechanisms drive phage infection efficiency in nearly identical hosts.

Authors:  Cristina Howard-Varona; Katherine R Hargreaves; Natalie E Solonenko; Lye Meng Markillie; Richard Allen White; Heather M Brewer; Charles Ansong; Galya Orr; Joshua N Adkins; Matthew B Sullivan
Journal:  ISME J       Date:  2018-03-22       Impact factor: 10.302

8.  A tale of tails: Sialidase is key to success in a model of phage therapy against K1-capsulated Escherichia coli.

Authors:  J J Bull; E R Vimr; I J Molineux
Journal:  Virology       Date:  2009-12-16       Impact factor: 3.616

9.  Spontaneous Reversions of an Evolutionary Trait Loss Reveal Regulators of a Small RNA That Controls Multicellular Development in Myxobacteria.

Authors:  Yuen-Tsu N Yu; Manuel Kleiner; Gregory J Velicer
Journal:  J Bacteriol       Date:  2016-11-04       Impact factor: 3.490

10.  The autolysin LytA contributes to efficient bacteriophage progeny release in Streptococcus pneumoniae.

Authors:  Maria João Frias; José Melo-Cristino; Mário Ramirez
Journal:  J Bacteriol       Date:  2009-07-06       Impact factor: 3.490

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