Literature DB >> 16095348

Intermolecular electrostatic energies using density fitting.

G Andrés Cisneros1, Jean-Philip Piquemal, Thomas A Darden.   

Abstract

A method is presented to calculate the electron-electron and nuclear-electron intermolecular Coulomb interaction energy between two molecules by separately fitting the unperturbed molecular electron density of each monomer. This method is based on the variational Coulomb fitting method which relies on the expansion of the ab initio molecular electron density in site-centered auxiliary basis sets. By expanding the electron density of each monomer in this way the integral expressions for the intermolecular electrostatic calculations are simplified, lowering the operation count as well as the memory usage. Furthermore, this method allows the calculation of intermolecular Coulomb interactions with any level of theory from which a one-electron density matrix can be obtained. Our implementation is initially tested by calculating molecular properties with the density fitting method using three different auxiliary basis sets and comparing them to results obtained from ab initio calculations. These properties include dipoles for a series of molecules, as well as the molecular electrostatic potential and electric field for water. Subsequently, the intermolecular electrostatic energy is tested by calculating ten stationary points on the water dimer potential-energy surface. Results are presented for electron densities obtained at four different levels of theory using two different basis sets, fitted with three auxiliary basis sets. Additionally, a one-dimensional electrostatic energy surface scan is performed for four different systems (H2O dimer, Mg2+-H2O, Cu+-H2O, and n-methyl-formamide dimer). Our results show a very good agreement with ab initio calculations for all properties as well as interaction energies.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16095348      PMCID: PMC2693352          DOI: 10.1063/1.1947192

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

1.  Second-order Møller-Plesset theory with linear R12 terms (MP2-R12) revisited: auxiliary basis set method and massively parallel implementation.

Authors:  Edward F Valeev; Curtis L Janssen
Journal:  J Chem Phys       Date:  2004-07-15       Impact factor: 3.488

2.  Calculation of electrostatic and polarization energies from electron densities.

Authors:  Yuguang Ma; Peter Politzer
Journal:  J Chem Phys       Date:  2004-02-15       Impact factor: 3.488

3.  Improved Formulas for the Calculation of the Electrostatic Contribution to the Intermolecular Interaction Energy from Multipolar Expansion of the Electronic Distribution.

Authors:  Jean-Philip Piquemal; Nohad Gresh; Claude Giessner-Prettre
Journal:  J Phys Chem A       Date:  2003-12-04       Impact factor: 2.781

4.  Density-functional theory-symmetry-adapted intermolecular perturbation theory with density fitting: a new efficient method to study intermolecular interaction energies.

Authors:  A Hesselmann; G Jansen; M Schütz
Journal:  J Chem Phys       Date:  2005-01-01       Impact factor: 3.488

5.  A CSOV study of the difference between HF and DFT intermolecular interaction energy values: the importance of the charge transfer contribution.

Authors:  Jean-Philip Piquemal; Antonio Marquez; Olivier Parisel; Claude Giessner-Prettre
Journal:  J Comput Chem       Date:  2005-07-30       Impact factor: 3.376

6.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15
  6 in total
  18 in total

1.  LICHEM: A QM/MM program for simulations with multipolar and polarizable force fields.

Authors:  Eric G Kratz; Alice R Walker; Louis Lagardère; Filippo Lipparini; Jean-Philip Piquemal; G Andrés Cisneros
Journal:  J Comput Chem       Date:  2016-01-18       Impact factor: 3.376

2.  Generalization of the Gaussian electrostatic model: extension to arbitrary angular momentum, distributed multipoles, and speedup with reciprocal space methods.

Authors:  G Andrés Cisneros; Jean-Philip Piquemal; Thomas A Darden
Journal:  J Chem Phys       Date:  2006-11-14       Impact factor: 3.488

3.  Quantum mechanics/molecular mechanics electrostatic embedding with continuous and discrete functions.

Authors:  G Andrés Cisneros; Jean-Philip Piquemal; Thomas A Darden
Journal:  J Phys Chem B       Date:  2006-07-20       Impact factor: 2.991

4.  Numerical fitting of molecular properties to Hermite Gaussians.

Authors:  G Andrés Cisneros; Dennis Elking; Jean-Philip Piquemal; Thomas A Darden
Journal:  J Phys Chem A       Date:  2007-11-01       Impact factor: 2.781

5.  Contracted auxiliary Gaussian basis integral and derivative evaluation.

Authors:  Timothy J Giese; Darrin M York
Journal:  J Chem Phys       Date:  2008-02-14       Impact factor: 3.488

Review 6.  Classical electrostatics for biomolecular simulations.

Authors:  G Andrés Cisneros; Mikko Karttunen; Pengyu Ren; Celeste Sagui
Journal:  Chem Rev       Date:  2013-08-27       Impact factor: 60.622

7.  Gaussian Multipole Model (GMM).

Authors:  Dennis M Elking; G Andrés Cisneros; Jean-Philip Piquemal; Thomas A Darden; Lee G Pedersen
Journal:  J Chem Theory Comput       Date:  2010       Impact factor: 6.006

8.  Atomic forces for geometry-dependent point multipole and gaussian multipole models.

Authors:  Dennis M Elking; Lalith Perera; Robert Duke; Thomas Darden; Lee G Pedersen
Journal:  J Comput Chem       Date:  2010-11-30       Impact factor: 3.376

9.  Limiting assumptions in molecular modeling: electrostatics.

Authors:  Garland R Marshall
Journal:  J Comput Aided Mol Des       Date:  2013-01-26       Impact factor: 3.686

10.  Towards a force field based on density fitting.

Authors:  Jean-Philip Piquemal; G Andrés Cisneros; Peter Reinhardt; Nohad Gresh; Thomas A Darden
Journal:  J Chem Phys       Date:  2006-03-14       Impact factor: 3.488

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.