Literature DB >> 16091304

Preparation of enzymatically active recombinant class III protein deacetylases.

Brian J North1, Bjoern Schwer, Nidhi Ahuja, Brett Marshall, Eric Verdin.   

Abstract

Class III histone deacetylases, or sirtuins, are homologous to the Saccharomyces cerevisiae transcriptional regulator SIR2. The class III enzymes are characterized by their dependence on nicotinamide adenine dinucleotide (NAD+). This cofactor serves as an acetyl-group acceptor in the deacetylation reaction generating O-acetyl-ADP-ribose. Enzymatic activity of sirtuin can be measured in vitro using recombinant proteins purified from mammalian cells after overexpression or after purification from Escherichia coli. This review discusses protocols for the purification of enzymatically active human sirtuin 1, 2, and 3 and their activities on histone and nonhistone substrates.

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Year:  2005        PMID: 16091304     DOI: 10.1016/j.ymeth.2005.03.004

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  17 in total

1.  Emerging Roles for SIRT5 in Metabolism and Cancer.

Authors:  Lauren R Bringman-Rodenbarger; Angela H Guo; Costas A Lyssiotis; David B Lombard
Journal:  Antioxid Redox Signal       Date:  2017-10-26       Impact factor: 8.401

2.  Sirt3 promotes the urea cycle and fatty acid oxidation during dietary restriction.

Authors:  William C Hallows; Wei Yu; Brian C Smith; Mark K Devries; Mark K Devires; James J Ellinger; Shinichi Someya; Michael R Shortreed; Tomas Prolla; John L Markley; Lloyd M Smith; Shimin Zhao; Kun-Liang Guan; John M Denu
Journal:  Mol Cell       Date:  2011-01-21       Impact factor: 17.970

3.  The Benefits of Calorie Restriction and Calorie Restriction Mimetics as Related to the Eye.

Authors:  T S Anekonda
Journal:  Open Longev Sci       Date:  2009

4.  The bicyclic intermediate structure provides insights into the desuccinylation mechanism of human sirtuin 5 (SIRT5).

Authors:  Yeyun Zhou; Hongmin Zhang; Bin He; Jintang Du; Hening Lin; Richard A Cerione; Quan Hao
Journal:  J Biol Chem       Date:  2012-07-05       Impact factor: 5.157

5.  Sirtuin 5 is Anti-apoptotic and Anti-oxidative in Cultured SH-EP Neuroblastoma Cells.

Authors:  Fengyi Liang; Xie Wang; Suet Hui Ow; Wangxue Chen; Wei Chen Ong
Journal:  Neurotox Res       Date:  2016-08-30       Impact factor: 3.911

6.  Suppression of oxidative stress by β-hydroxybutyrate, an endogenous histone deacetylase inhibitor.

Authors:  Tadahiro Shimazu; Matthew D Hirschey; John Newman; Wenjuan He; Kotaro Shirakawa; Natacha Le Moan; Carrie A Grueter; Hyungwook Lim; Laura R Saunders; Robert D Stevens; Christopher B Newgard; Robert V Farese; Rafael de Cabo; Scott Ulrich; Katerina Akassoglou; Eric Verdin
Journal:  Science       Date:  2012-12-06       Impact factor: 47.728

7.  Plasmodium falciparum Sir2: an unusual sirtuin with dual histone deacetylase and ADP-ribosyltransferase activity.

Authors:  Catherine J Merrick; Manoj T Duraisingh
Journal:  Eukaryot Cell       Date:  2007-09-07

8.  GAPDH mediates nitrosylation of nuclear proteins.

Authors:  Michael D Kornberg; Nilkantha Sen; Makoto R Hara; Krishna R Juluri; Judy Van K Nguyen; Adele M Snowman; Lindsey Law; Lynda D Hester; Solomon H Snyder
Journal:  Nat Cell Biol       Date:  2010-10-24       Impact factor: 28.824

Review 9.  Metabolic and neuropsychiatric effects of calorie restriction and sirtuins.

Authors:  Sergiy Libert; Leonard Guarente
Journal:  Annu Rev Physiol       Date:  2012-10-01       Impact factor: 19.318

10.  SIRT3 is a stress-responsive deacetylase in cardiomyocytes that protects cells from stress-mediated cell death by deacetylation of Ku70.

Authors:  Nagalingam R Sundaresan; Sadhana A Samant; Vinodkumar B Pillai; Senthilkumar B Rajamohan; Mahesh P Gupta
Journal:  Mol Cell Biol       Date:  2008-08-18       Impact factor: 4.272

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