Literature DB >> 16083424

Characterization of CA XV, a new GPI-anchored form of carbonic anhydrase.

Mika Hilvo1, Martti Tolvanen, Amy Clark, Bairong Shen, Gul N Shah, Abdul Waheed, Piia Halmi, Milla Hänninen, Jonna M Hämäläinen, Mauno Vihinen, William S Sly, Seppo Parkkila.   

Abstract

The main function of CAs (carbonic anhydrases) is to participate in the regulation of acid-base balance. Although 12 active isoenzymes of this family had already been described, analyses of genomic databases suggested that there still exists another isoenzyme, CA XV. Sequence analyses were performed to identify those species that are likely to have an active form of this enzyme. Eight species had genomic sequences encoding CA XV, in which all the amino acid residues critical for CA activity are present. However, based on the sequence data, it was apparent that CA XV has become a non-processed pseudogene in humans and chimpanzees. RT-PCR (reverse transcriptase PCR) confirmed that humans do not express CA XV. In contrast, RT-PCR and in situ hybridization performed in mice showed positive expression in the kidney, brain and testis. A prediction of the mouse CA XV structure was performed. Phylogenetic analysis showed that mouse CA XV is related to CA IV. Therefore both of these enzymes were expressed in COS-7 cells and studied in parallel experiments. The results showed that CA XV shares several properties with CA IV, i.e. it is a glycosylated glycosylphosphatidylinositol-anchored membrane protein, and it binds CA inhibitor. The catalytic activity of CA XV is low, and the correct formation of disulphide bridges is important for the activity. Both specific and non-specific chaperones increase the production of active enzyme. The results suggest that CA XV is the first member of the alpha-CA gene family that is expressed in several species, but not in humans and chimpanzees.

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Year:  2005        PMID: 16083424      PMCID: PMC1317667          DOI: 10.1042/BJ20051102

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  41 in total

1.  Secretion of carbonic anhydrase isoenzyme VI (CA VI) from human and rat lingual serous von Ebner's glands.

Authors:  J Leinonen; S Parkkila; K Kaunisto; P Koivunen; H Rajaniemi
Journal:  J Histochem Cytochem       Date:  2001-05       Impact factor: 2.479

2.  BLAT--the BLAST-like alignment tool.

Authors:  W James Kent
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

Review 3.  Carbonic anhydrase: new insights for an ancient enzyme.

Authors:  B C Tripp; K Smith; J G Ferry
Journal:  J Biol Chem       Date:  2001-11-05       Impact factor: 5.157

4.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

5.  The extracellular component of a transport metabolon. Extracellular loop 4 of the human AE1 Cl-/HCO3- exchanger binds carbonic anhydrase IV.

Authors:  Deborah Sterling; Bernardo V Alvarez; Joseph R Casey
Journal:  J Biol Chem       Date:  2002-05-06       Impact factor: 5.157

6.  Mitochondrial carbonic anhydrase CA VB: differences in tissue distribution and pattern of evolution from those of CA VA suggest distinct physiological roles.

Authors:  G N Shah; D Hewett-Emmett; J H Grubb; M C Migas; R E Fleming; A Waheed; W S Sly
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

7.  Carbonic anhydrase IX, MN/CA IX: analysis of stomach complementary DNA sequence and expression in human and rat alimentary tracts.

Authors:  S Pastoreková; S Parkkila; A K Parkkila; R Opavský; V Zelník; J Saarnio; J Pastorek
Journal:  Gastroenterology       Date:  1997-02       Impact factor: 22.682

8.  Expression of membrane-associated carbonic anhydrase XIV on neurons and axons in mouse and human brain.

Authors:  S Parkkila; A K Parkkila; H Rajaniemi; G N Shah; J H Grubb; A Waheed; W S Sly
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

9.  Direct extracellular interaction between carbonic anhydrase IV and the human NBC1 sodium/bicarbonate co-transporter.

Authors:  Bernardo V Alvarez; Frederick B Loiselle; Claudiu T Supuran; George J Schwartz; Joseph R Casey
Journal:  Biochemistry       Date:  2003-10-28       Impact factor: 3.162

10.  Localization of carbonic anhydrase XII to the basolateral membrane of H+-secreting cells of mouse and rat kidney.

Authors:  Matti S Kyllönen; Seppo Parkkila; Hannu Rajaniemi; Abdul Waheed; Jeffrey H Grubb; Gul N Shah; William S Sly; Kari Kaunisto
Journal:  J Histochem Cytochem       Date:  2003-09       Impact factor: 2.479

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  27 in total

1.  Carbonic anhydrase gene expression in CA II-deficient (Car2-/-) and CA IX-deficient (Car9-/-) mice.

Authors:  Peiwen Pan; Mari Leppilampi; Silvia Pastorekova; Jaromir Pastorek; Abdul Waheed; William S Sly; Seppo Parkkila
Journal:  J Physiol       Date:  2006-01-05       Impact factor: 5.182

Review 2.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding.

Authors:  Vijay M Krishnamurthy; George K Kaufman; Adam R Urbach; Irina Gitlin; Katherine L Gudiksen; Douglas B Weibel; George M Whitesides
Journal:  Chem Rev       Date:  2008-03       Impact factor: 60.622

3.  Gene expression profiling in the submandibular gland, stomach, and duodenum of CAVI-deficient mice.

Authors:  Pei-wen Pan; Katri Käyrä; Jukka Leinonen; Marja Nissinen; Seppo Parkkila; Hannu Rajaniemi
Journal:  Transgenic Res       Date:  2010-09-11       Impact factor: 2.788

Review 4.  Carbonic anhydrase XII functions in health and disease.

Authors:  Abdul Waheed; William S Sly
Journal:  Gene       Date:  2017-04-19       Impact factor: 3.688

5.  Targeted mutagenesis of mitochondrial carbonic anhydrases VA and VB implicates both enzymes in ammonia detoxification and glucose metabolism.

Authors:  Gul N Shah; Timothy S Rubbelke; Joshua Hendin; Hien Nguyen; Abdul Waheed; James D Shoemaker; William S Sly
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-15       Impact factor: 11.205

6.  Pharmacological inhibition of mitochondrial carbonic anhydrases protects mouse cerebral pericytes from high glucose-induced oxidative stress and apoptosis.

Authors:  Gul N Shah; Tulin O Price; William A Banks; Yoichi Morofuji; Andrej Kovac; Nuran Ercal; Christine M Sorenson; Eui S Shin; Nader Sheibani
Journal:  J Pharmacol Exp Ther       Date:  2012-12-17       Impact factor: 4.030

7.  The tumour-associated carbonic anhydrases CA II, CA IX and CA XII in a group of medulloblastomas and supratentorial primitive neuroectodermal tumours: an association of CA IX with poor prognosis.

Authors:  Kristiina Nordfors; Joonas Haapasalo; Miikka Korja; Anssi Niemelä; Jukka Laine; Anna-Kaisa Parkkila; Silvia Pastorekova; Jaromir Pastorek; Abdul Waheed; William S Sly; Seppo Parkkila; Hannu Haapasalo
Journal:  BMC Cancer       Date:  2010-04-18       Impact factor: 4.430

8.  The most recently discovered carbonic anhydrase, CA XV, is expressed in the thick ascending limb of Henle and in the collecting ducts of mouse kidney.

Authors:  Sina Saari; Mika Hilvo; Peiwen Pan; Gerolf Gros; Nina Hanke; Abdul Waheed; William S Sly; Seppo Parkkila
Journal:  PLoS One       Date:  2010-03-10       Impact factor: 3.240

9.  Global transcriptional response to carbonic anhydrase IX deficiency in the mouse stomach.

Authors:  Heini Kallio; Mika Hilvo; Alejandra Rodriguez; Eeva-Helena Lappalainen; Anna-Maria Lappalainen; Seppo Parkkila
Journal:  BMC Genomics       Date:  2010-06-23       Impact factor: 3.969

10.  Carbonic anhydrase XIV deficiency produces a functional defect in the retinal light response.

Authors:  Judith Mosinger Ogilvie; Kevin K Ohlemiller; Gul N Shah; Barbara Ulmasov; Timothy A Becker; Abdul Waheed; Anne K Hennig; Peter D Lukasiewicz; William S Sly
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-07       Impact factor: 11.205

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