Literature DB >> 16081329

Solution structure of beta(2)-microglobulin and insights into fibrillogenesis.

Gennaro Esposito1, Alessandra Corazza, Paolo Viglino, Giuliana Verdone, Fabio Pettirossi, Federico Fogolari, Ads Makek, Sofia Giorgetti, Palma Mangione, Monica Stoppini, Vittorio Bellotti.   

Abstract

The solution structure of human beta(2)-microglobulin (beta(2)-m) was determined by (1)H NMR spectroscopy and restrained modeling calculations. Compared to the crystal structure of type I major histocompatibility complex (MHC-I), where the protein is associated to the heavy-chain component, several differences are observed, i.e., increased separation between strands A and B, displacements of strand C' and loop DE, shortening of strands D and E. These modifications can be considered as the prodromes of the amyloid transition. Even minor charge changes in response to pH, as is the case with H31 imidazole protonation, trigger the transition that starts with unpairing of strand A. The same mechanism accounts for the partial unfolding and fiber formation subsequent to Cu(2+) binding which is shown to occur primarily at H31. Solvation of the protected regions in MHC-I decreases the tertiary packing by breaking the contiguity of the surface hydrophobic patches via surface charge cluster. Mutants or truncated forms of beta(2)-m can be designed to remove the instability from H31 titration or to enhance the instability through surface charge suppression. By monitoring the conformational evolution of wild-type protein and variants thereof, either in response or absence of external perturbation, valuable insights into intermediate structure and fibrillogenesis mechanisms are gained.

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Year:  2005        PMID: 16081329     DOI: 10.1016/j.bbapap.2005.07.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  10 in total

1.  Structure of an early native-like intermediate of β2-microglobulin amyloidogenesis.

Authors:  Saskia Vanderhaegen; Marcus Fislage; Katarzyna Domanska; Wim Versées; Els Pardon; Vittorio Bellotti; Jan Steyaert
Journal:  Protein Sci       Date:  2013-08-20       Impact factor: 6.725

2.  Direct observation of minimum-sized amyloid fibrils using solution NMR spectroscopy.

Authors:  Yuichi Yoshimura; Kazumasa Sakurai; Young-Ho Lee; Takahisa Ikegami; Eri Chatani; Hironobu Naiki; Yuji Goto
Journal:  Protein Sci       Date:  2010-11-11       Impact factor: 6.725

3.  Molecular dynamics simulation suggests possible interaction patterns at early steps of beta2-microglobulin aggregation.

Authors:  Federico Fogolari; Alessandra Corazza; Paolo Viglino; Pierfrancesco Zuccato; Lidia Pieri; Pietro Faccioli; Vittorio Bellotti; Gennaro Esposito
Journal:  Biophys J       Date:  2006-12-08       Impact factor: 4.033

4.  Dynamics of free versus complexed β2-microglobulin and the evolution of interfaces in MHC class I molecules.

Authors:  Chee-Seng Hee; Monika Beerbaum; Bernhard Loll; Martin Ballaschk; Peter Schmieder; Barbara Uchanska-Ziegler; Andreas Ziegler
Journal:  Immunogenetics       Date:  2012-12-11       Impact factor: 2.846

5.  Delineating the conformational elements responsible for Cu(2+)-induced oligomerization of beta-2 microglobulin.

Authors:  Dorottya V Blaho; Andrew D Miranker
Journal:  Biochemistry       Date:  2009-07-21       Impact factor: 3.162

Review 6.  Understanding the complex mechanisms of β2-microglobulin amyloid assembly.

Authors:  Timo Eichner; Sheena E Radford
Journal:  FEBS J       Date:  2011-06-13       Impact factor: 5.542

7.  Studying interactions by molecular dynamics simulations at high concentration.

Authors:  Federico Fogolari; Alessandra Corazza; Stefano Toppo; Silvio C E Tosatto; Paolo Viglino; Fulvio Ursini; Gennaro Esposito
Journal:  J Biomed Biotechnol       Date:  2012-02-22

8.  The Early Phase of β2m Aggregation: An Integrative Computational Study Framed on the D76N Mutant and the ΔN6 Variant.

Authors:  Rui J S Loureiro; Diogo Vila-Viçosa; Miguel Machuqueiro; Eugene I Shakhnovich; Patrícia F N Faísca
Journal:  Biomolecules       Date:  2019-08-14

9.  Collagen I Weakly Interacts with the β-Sheets of β2-Microglobulin and Enhances Conformational Exchange To Induce Amyloid Formation.

Authors:  Cody L Hoop; Jie Zhu; Shibani Bhattacharya; Caitlyn A Tobita; Sheena E Radford; Jean Baum
Journal:  J Am Chem Soc       Date:  2020-01-08       Impact factor: 15.419

10.  Insights into a Protein-Nanoparticle System by Paramagnetic Perturbation NMR Spectroscopy.

Authors:  Yamanappa Hunashal; Cristina Cantarutti; Sofia Giorgetti; Loredana Marchese; Federico Fogolari; Gennaro Esposito
Journal:  Molecules       Date:  2020-11-07       Impact factor: 4.411

  10 in total

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