Literature DB >> 16078372

Evolution of the NadR regulon in Enterobacteriaceae.

Anna V Gerasimova1, Mikhail S Gelfand.   

Abstract

The NAD biosynthetic pathway and NAD transformations in E. coli and S. typhi are well characterized. Using comparative genomics methods we describe the NadR regulon in other Enterobacteriaceae, identity new candidate regulon members and demonstrate that even a very simple regulon covering an essential methabolic pathway could be different in closely related genomes.

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Year:  2005        PMID： 16078372     DOI： 10.1142/s0219720005001387

Source DB:  PubMed          Journal:  J Bioinform Comput Biol        ISSN： 0219-7200            Impact factor:   1.122


  12 in total

Review 1.  Comparative genomic reconstruction of transcriptional regulatory networks in bacteria.

Authors:  Dmitry A Rodionov
Journal:  Chem Rev       Date:  2007-07-18       Impact factor: 60.622

2.  Regulation of the expression of genes involved in NAD de novo biosynthesis in Corynebacterium glutamicum.

Authors:  Haruhiko Teramoto; Masako Suda; Masayuki Inui; Hideaki Yukawa
Journal:  Appl Environ Microbiol       Date:  2010-07-02       Impact factor: 4.792

3.  Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism.

Authors:  Nian Huang; Jessica De Ingeniis; Luca Galeazzi; Chiara Mancini; Yuri D Korostelev; Alexandra B Rakhmaninova; Mikhail S Gelfand; Dmitry A Rodionov; Nadia Raffaelli; Hong Zhang
Journal:  Structure       Date:  2009-07-15       Impact factor: 5.006

4.  Biogenesis and Homeostasis of Nicotinamide Adenine Dinucleotide Cofactor.

Authors:  Andrei Osterman
Journal:  EcoSal Plus       Date:  2009-08

5.  Functional definition of NrtR, a remnant regulator of NAD+ homeostasis in the zoonotic pathogen Streptococcus suis.

Authors:  Qingjing Wang; Bachar H Hassan; Ningjie Lou; Justin Merritt; Youjun Feng
Journal:  FASEB J       Date:  2019-02-13       Impact factor: 5.834

6.  Dynamics and genetic diversification of Escherichia coli during experimental adaptation to an anaerobic environment.

Authors:  Thomas J Finn; Sonal Shewaramani; Sinead C Leahy; Peter H Janssen; Christina D Moon
Journal:  PeerJ       Date:  2017-05-03       Impact factor: 2.984

7.  A model of evolution with constant selective pressure for regulatory DNA sites.

Authors:  Farida N Enikeeva; Ekaterina A Kotelnikova; Mikhail S Gelfand; Vsevolod J Makeev
Journal:  BMC Evol Biol       Date:  2007-07-27       Impact factor: 3.260

8.  Transcriptional regulation of NAD metabolism in bacteria: genomic reconstruction of NiaR (YrxA) regulon.

Authors:  Dmitry A Rodionov; Xiaoqing Li; Irina A Rodionova; Chen Yang; Leonardo Sorci; Etienne Dervyn; Dariusz Martynowski; Hong Zhang; Mikhail S Gelfand; Andrei L Osterman
Journal:  Nucleic Acids Res       Date:  2008-02-14       Impact factor: 16.971

9.  Transcriptional regulation of NAD metabolism in bacteria: NrtR family of Nudix-related regulators.

Authors:  Dmitry A Rodionov; Jessica De Ingeniis; Chiara Mancini; Flavio Cimadamore; Hong Zhang; Andrei L Osterman; Nadia Raffaelli
Journal:  Nucleic Acids Res       Date:  2008-02-14       Impact factor: 16.971

10.  Structural and Functional Characterization of NadR from Lactococcus lactis.

Authors:  Artem Stetsenko; Rajkumar Singh; Michael Jaehme; Albert Guskov; Dirk Jan Slotboom
Journal:  Molecules       Date:  2020-04-22       Impact factor: 4.411
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