Literature DB >> 16075083

A new class of DNA quadruplexes formed by oligodeoxyribonucleotides containing a 3'-3' or 5'-5' inversion of polarity site.

Veronica Esposito1, Antonella Virgilio, Antonio Randazzo, Aldo Galeone, Luciano Mayol.   

Abstract

Unprecedented DNA quadruplex structures containing a 3'-3' or 5'-5' inversion of polarity site in the G-tract are presented; the quadruplexes are characterized by different elements of symmetry and glycosidic angle conformations.

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Year:  2005        PMID: 16075083     DOI: 10.1039/b504455c

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  11 in total

1.  Resolution of quadruplex polymorphism by size-exclusion chromatography.

Authors:  M Clarke Miller; John O Trent
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2011-06

2.  Polymorphism and resolution of oncogene promoter quadruplex-forming sequences.

Authors:  M Clarke Miller; Huy T Le; William L Dean; Patrick A Holt; Jonathan B Chaires; John O Trent
Journal:  Org Biomol Chem       Date:  2011-09-21       Impact factor: 3.876

Review 3.  In What Ways Do Synthetic Nucleotides and Natural Base Lesions Alter the Structural Stability of G-Quadruplex Nucleic Acids?

Authors:  Janos Sagi
Journal:  J Nucleic Acids       Date:  2017-10-18

4.  Calculation of hydrodynamic properties for G-quadruplex nucleic acid structures from in silico bead models.

Authors:  Huy T Le; Robert Buscaglia; William L Dean; Jonathan B Chaires; John O Trent
Journal:  Top Curr Chem       Date:  2013

5.  Not all G-quadruplexes are created equally: an investigation of the structural polymorphism of the c-Myc G-quadruplex-forming sequence and its interaction with the porphyrin TMPyP4.

Authors:  Huy T Le; M Clarke Miller; Robert Buscaglia; William L Dean; Patrick A Holt; Jonathan B Chaires; John O Trent
Journal:  Org Biomol Chem       Date:  2012-10-29       Impact factor: 3.876

6.  Separation of Quadruplex Polymorphism in DNA Sequences by Reversed-Phase Chromatography.

Authors:  M Clarke Miller; Carl J Ohrenberg; Ashani Kuttan; John O Trent
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2015-06-01

7.  Strand directionality affects cation binding and movement within tetramolecular G-quadruplexes.

Authors:  Primoz Šket; Antonella Virgilio; Veronica Esposito; Aldo Galeone; Janez Plavec
Journal:  Nucleic Acids Res       Date:  2012-09-12       Impact factor: 16.971

8.  The insertion of two 8-methyl-2'-deoxyguanosine residues in tetramolecular quadruplex structures: trying to orientate the strands.

Authors:  Antonella Virgilio; Veronica Esposito; Giuseppe Citarella; Antonietta Pepe; Luciano Mayol; Aldo Galeone
Journal:  Nucleic Acids Res       Date:  2011-09-09       Impact factor: 16.971

9.  Self-Assembly of G-Rich Oligonucleotides Incorporating a 3'-3' Inversion of Polarity Site: A New Route Towards G-Wire DNA Nanostructures.

Authors:  Giorgia Oliviero; Stefano D'Errico; Brunella Pinto; Fabrizia Nici; Principia Dardano; Ilaria Rea; Luca De Stefano; Luciano Mayol; Gennaro Piccialli; Nicola Borbone
Journal:  ChemistryOpen       Date:  2017-06-13       Impact factor: 2.911

10.  Investigation and improvement of catalytic activity of G-quadruplex/hemin DNAzymes using designed terminal G-tetrads with deoxyadenosine caps.

Authors:  Yanwei Cao; Pi Ding; Luyan Yang; Wenjing Li; Yu Luo; Jine Wang; Renjun Pei
Journal:  Chem Sci       Date:  2020-06-17       Impact factor: 9.825

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