Literature DB >> 16059907

Duplicated members of the Groucho/Tle gene family in fish.

Narges Aghaallaei1, Baubak Bajoghli, Ingrid Walter, Thomas Czerny.   

Abstract

The highly conserved Groucho/Tle gene family has widespread functions during embryonic development and in adults. For mammalians, four full-length Tle paralogues are known, whereas the whole spectrum of this gene family in fish species has not been analysed yet. Most detailed data exist for medaka, where 3 Tle genes have been described, Tle1, Tle3, and Tle4. We now isolated 3 additional Tle genes from the medaka genome. Sequence analysis identifies these genes as Tle2a, Tle2b, and Tle3b. Database searches of genomic sequences revealed an identical set of Tle paralogues being present in distantly related fish species, indicating duplicated Tle2 and Tle3 genes for the complete teleost lineage. Like the previously analysed medaka Tle genes, the three new genes show a broad expression pattern during embryogenesis. Nevertheless, a detailed comparison of all six Tle genes reveals critical differences in certain aspects of their expression pattern. In particular, we concentrated on the activity of Tle genes during ear development and found Tle2a and Tle2b expressed in this sensory organ. Copyright 2005 Wiley-Liss, Inc.

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Year:  2005        PMID: 16059907     DOI: 10.1002/dvdy.20510

Source DB:  PubMed          Journal:  Dev Dyn        ISSN: 1058-8388            Impact factor:   3.780


  13 in total

1.  Gbx2 and Otx2 interact with the WD40 domain of Groucho/Tle corepressors.

Authors:  Thomas Heimbucher; Christina Murko; Baubak Bajoghli; Narges Aghaallaei; Anja Huber; Ronald Stebegg; Dirk Eberhard; Maria Fink; Antonio Simeone; Thomas Czerny
Journal:  Mol Cell Biol       Date:  2006-10-23       Impact factor: 4.272

2.  Evolution of the Groucho/Tle gene family: gene organization and duplication events.

Authors:  Baubak Bajoghli
Journal:  Dev Genes Evol       Date:  2007-07-12       Impact factor: 0.900

Review 3.  AES/GRG5: more than just a dominant-negative TLE/GRG family member.

Authors:  Brandon Beagle; Gail V W Johnson
Journal:  Dev Dyn       Date:  2010-11       Impact factor: 3.780

4.  Wnt/Axin1/beta-catenin signaling regulates asymmetric nodal activation, elaboration, and concordance of CNS asymmetries.

Authors:  Matthias Carl; Isaac H Bianco; Baubak Bajoghli; Narges Aghaallaei; Thomas Czerny; Stephen W Wilson
Journal:  Neuron       Date:  2007-08-02       Impact factor: 17.173

5.  Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools.

Authors:  Mirana Ramialison; Baubak Bajoghli; Narges Aghaallaei; Laurence Ettwiller; Sylvain Gaudan; Beate Wittbrodt; Thomas Czerny; Joachim Wittbrodt
Journal:  Genome Biol       Date:  2008-10-01       Impact factor: 13.583

6.  Induction of otic structures by canonical Wnt signalling in medaka.

Authors:  Baubak Bajoghli; Narges Aghaallaei; Gerlinde Jung; Thomas Czerny
Journal:  Dev Genes Evol       Date:  2009-09-16       Impact factor: 0.900

7.  Side chain modified peptide nucleic acids (PNA) for knock-down of six3 in medaka embryos.

Authors:  Sebastian Dorn; Narges Aghaallaei; Gerlinde Jung; Baubak Bajoghli; Birgit Werner; Holger Bock; Thomas Lindhorst; Thomas Czerny
Journal:  BMC Biotechnol       Date:  2012-08-17       Impact factor: 2.563

8.  The Groucho/TLE/Grg family of transcriptional co-repressors.

Authors:  Barbara H Jennings; David Ish-Horowicz
Journal:  Genome Biol       Date:  2008-01-31       Impact factor: 13.583

9.  The germ cell nuclear proteins hnRNP G-T and RBMY activate a testis-specific exon.

Authors:  Yilei Liu; Cyril F Bourgeois; Shaochen Pang; Marek Kudla; Natacha Dreumont; Liliane Kister; Yong-Hua Sun; James Stevenin; David J Elliott
Journal:  PLoS Genet       Date:  2009-11-06       Impact factor: 5.917

10.  Identification, visualization and clonal analysis of intestinal stem cells in fish.

Authors:  Narges Aghaallaei; Franziska Gruhl; Colin Q Schaefer; Tobias Wernet; Venera Weinhardt; Lázaro Centanin; Felix Loosli; Tilo Baumbach; Joachim Wittbrodt
Journal:  Development       Date:  2016-08-30       Impact factor: 6.868

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