Literature DB >> 16041073

Ab initio phasing at resolution higher than experimental resolution.

Rocco Caliandro1, Benedetta Carrozzini, Giovani L Cascarano, Liberato De Caro, Carmelo Giacovazzo, Dritan Siliqi.   

Abstract

Owing to the limited experimental resolution of data in macromolecular crystallography, ab initio phasing is successful only when atomic or quasi-atomic resolution data are available. It is shown that extrapolating the moduli and phases of non-measured reflections beyond and behind the experimental resolution limit makes the ab initio phasing process more efficient and leads to crystal structure solution even in cases in which the standard SIR2004 program does not succeed. Moreover, use of the extrapolated values improves the quality of the final electron-density maps and makes the recognition of the correct structure among several trial structures easier.

Mesh:

Year:  2005        PMID: 16041073     DOI: 10.1107/S0907444905015519

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Practical structure solution with ARCIMBOLDO.

Authors:  Dayté Rodríguez; Massimo Sammito; Kathrin Meindl; Iñaki M de Ilarduya; Marianus Potratz; George M Sheldrick; Isabel Usón
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16

Review 2.  Macromolecular ab initio phasing enforcing secondary and tertiary structure.

Authors:  Claudia Millán; Massimo Sammito; Isabel Usón
Journal:  IUCrJ       Date:  2015-01-01       Impact factor: 4.769

3.  ARCIMBOLDO on coiled coils.

Authors:  Iracema Caballero; Massimo Sammito; Claudia Millán; Andrey Lebedev; Nicolas Soler; Isabel Usón
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-03-02       Impact factor: 7.652

4.  A new density-modification procedure extending the application of the recent |ρ|-based phasing algorithm to larger crystal structures.

Authors:  Jordi Rius; Xavier Torrelles
Journal:  Acta Crystallogr A Found Adv       Date:  2021-06-21       Impact factor: 2.290

5.  Extending molecular-replacement solutions with SHELXE.

Authors:  Andrea Thorn; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-10-18

6.  How far are we from automatic crystal structure solution via molecular-replacement techniques?

Authors:  Maria Cristina Burla; Benedetta Carrozzini; Giovanni Luca Cascarano; Carmelo Giacovazzo; Giampiero Polidori
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-01-01       Impact factor: 7.652

  6 in total

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