Literature DB >> 16039824

A genome-wide set of congenic mouse strains derived from DBA/2J on a C57BL/6J background.

Richard C Davis1, Eric E Schadt, Desmond J Smith, Elena W Y Hsieh, Alessandra C L Cervino, Atila van Nas, Melenie Rosales, Sudheer Doss, Haijin Meng, Hooman Allayee, Aldons J Lusis.   

Abstract

In the analysis of complex traits, congenic strains are powerful tools because they allow characterization of a single locus in the absence of genetic variation throughout the remainder of the genome. Here, we report the construction and initial characterization of a genome-wide panel of congenic strains derived from the donor strain DBA/2J on the background strain C57BL/6J. For many strains, we have carried out high-density SNP genotyping to precisely map the congenic interval and to identify any contaminating regions. Certain strains exhibit striking variation in litter size and in the ratio of females to males. We illustrate the utility of the set by "Mendelizing" the complex trait of myocardial calcification. These 65 strains cover more than 95% of the autosomal genome and should facilitate the analysis of the many genetic trait differences that have been reported between these parental strains.

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Year:  2005        PMID: 16039824     DOI: 10.1016/j.ygeno.2005.05.010

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  17 in total

1.  β-Actin and fascin-2 cooperate to maintain stereocilia length.

Authors:  Benjamin J Perrin; Dana M Strandjord; Praveena Narayanan; Davin M Henderson; Kenneth R Johnson; James M Ervasti
Journal:  J Neurosci       Date:  2013-05-08       Impact factor: 6.167

2.  A comprehensive mouse IBD database for the efficient localization of quantitative trait loci.

Authors:  Alessandra C L Cervino; Mark Gosink; Mohammad Fallahi; Bruce Pascal; Christopher Mader; Nicholas F Tsinoremas
Journal:  Mamm Genome       Date:  2006-06-12       Impact factor: 2.957

3.  A QTL on Chr 5 modifies hearing loss associated with the fascin-2 variant of DBA/2J mice.

Authors:  Kenneth R Johnson; Chantal M Longo-Guess; Leona H Gagnon
Journal:  Mamm Genome       Date:  2015-06-20       Impact factor: 2.957

4.  Genetic loci that control the size of laser-induced choroidal neovascularization.

Authors:  Kei Nakai; Michael S Rogers; Takashi Baba; Taisaku Funakoshi; Amy E Birsner; Dema S Luyindula; Robert J D'Amato
Journal:  FASEB J       Date:  2009-02-23       Impact factor: 5.191

5.  Dissociation of seizure traits in inbred strains of mice using the flurothyl kindling model of epileptogenesis.

Authors:  Dominick Papandrea; Tara M Anderson; Bruce J Herron; Russell J Ferland
Journal:  Exp Neurol       Date:  2008-10-07       Impact factor: 5.330

6.  Memory CD8⁺ T cells can outsource IFN-γ production but not cytolytic killing for antiviral protection.

Authors:  Sanda Remakus; Daniel Rubio; Avital Lev; Xueying Ma; Min Fang; Ren-Huan Xu; Luis J Sigal
Journal:  Cell Host Microbe       Date:  2013-05-15       Impact factor: 21.023

7.  Genetic mapping of vocalization to a series of increasing acute footshocks using B6.A consomic and B6.D2 congenic mouse strains.

Authors:  Douglas B Matthews; Elissa J Chesler; Melloni N Cook; Jody Cockroft; Vivek M Philip; Dan Goldowitz
Journal:  Behav Genet       Date:  2008-06-06       Impact factor: 2.805

8.  Interspecific recombinant congenic strains between C57BL/6 and mice of the Mus spretus species: a powerful tool to dissect genetic control of complex traits.

Authors:  Gaëtan Burgio; Marek Szatanik; Jean-Louis Guénet; Maria-Rosa Arnau; Jean-Jacques Panthier; Xavier Montagutelli
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

9.  Mouse consomic strains: exploiting genetic divergence between Mus m. musculus and Mus m. domesticus subspecies.

Authors:  Sona Gregorová; Petr Divina; Radka Storchova; Zdenek Trachtulec; Vladana Fotopulosova; Karen L Svenson; Leah Rae Donahue; Beverly Paigen; Jiri Forejt
Journal:  Genome Res       Date:  2008-02-06       Impact factor: 9.043

10.  Mouse genomic variation and its effect on phenotypes and gene regulation.

Authors:  Thomas M Keane; Leo Goodstadt; Petr Danecek; Michael A White; Kim Wong; Binnaz Yalcin; Andreas Heger; Avigail Agam; Guy Slater; Martin Goodson; Nicholas A Furlotte; Eleazar Eskin; Christoffer Nellåker; Helen Whitley; James Cleak; Deborah Janowitz; Polinka Hernandez-Pliego; Andrew Edwards; T Grant Belgard; Peter L Oliver; Rebecca E McIntyre; Amarjit Bhomra; Jérôme Nicod; Xiangchao Gan; Wei Yuan; Louise van der Weyden; Charles A Steward; Sendu Bala; Jim Stalker; Richard Mott; Richard Durbin; Ian J Jackson; Anne Czechanski; José Afonso Guerra-Assunção; Leah Rae Donahue; Laura G Reinholdt; Bret A Payseur; Chris P Ponting; Ewan Birney; Jonathan Flint; David J Adams
Journal:  Nature       Date:  2011-09-14       Impact factor: 49.962

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