Literature DB >> 16039672

Experimental design for optimal parameter estimation of an enzyme kinetic process based on the analysis of the Fisher information matrix.

Patrick Felix Oliver Lindner1, Bernd Hitzmann.   

Abstract

The investigation of enzyme kinetics is increasingly important, especially for finding active substances and understanding intracellular behaviors. Therefore, the determination of an enzyme's kinetic parameters is crucial. For this a systematic experimental design procedure is necessary to avoid wasting time and resources. The parameter estimation error of a Michaelis-Menten enzyme kinetic process is analysed analytically to reduce the search area as well as numerically to specify the optimum for parameter estimation. From analytical analysis of the Fisher information matrix the fact is obtained, that an enzyme feed will not improve the estimation process, but substrate feeding is favorable with small volume flow. Unconstrained and constrained process conditions are considered. If substrate fed-batch process design is used instead of pure batch experiments the improvements of the Cramer-Rao lower bound of the variance of parameter estimation error reduces to 82% for mu(max) and to 60% for K(m) of the batch values in average.

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Year:  2005        PMID: 16039672     DOI: 10.1016/j.jtbi.2005.05.016

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  4 in total

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Authors:  Andrew D Wilson; Todd D Murphey
Journal:  Proc Am Control Conf       Date:  2014

2.  Trajectory Synthesis for Fisher Information Maximization.

Authors:  Andrew D Wilson; Jarvis A Schultz; Todd D Murphey
Journal:  IEEE Trans Robot       Date:  2014-12-05       Impact factor: 5.567

3.  Monte Carlo Simulations for the Analysis of Non-linear Parameter Confidence Intervals in Optimal Experimental Design.

Authors:  Niels Krausch; Tilman Barz; Annina Sawatzki; Mathis Gruber; Sarah Kamel; Peter Neubauer; Mariano Nicolas Cruz Bournazou
Journal:  Front Bioeng Biotechnol       Date:  2019-05-24

4.  Retinitis pigmentosa: rapid neurodegeneration is governed by slow cell death mechanisms.

Authors:  A Sahaboglu; O Paquet-Durand; J Dietter; K Dengler; S Bernhard-Kurz; P Ar Ekström; B Hitzmann; M Ueffing; F Paquet-Durand
Journal:  Cell Death Dis       Date:  2013-02-07       Impact factor: 8.469

  4 in total

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