Literature DB >> 16039295

A genome wide quantitative trait linkage analysis for serum lipids in type 2 diabetes in an African population.

Adebowale A Adeyemo1, Thomas Johnson, Joseph Acheampong, Johnnie Oli, Godfrey Okafor, Albert Amoah, Samuel Owusu, Kofi Agyenim-Boateng, Benjamin A Eghan, Fayeofori Abbiyesuku, Olufemi Fasanmade, Theresa Rufus, Ayo Doumatey, Guanjie Chen, Jie Zhou, Yuanxiu Chen, Paulette Furbert-Harris, Georgia Dunston, Francis Collins, Charles Rotimi.   

Abstract

Lipid abnormalities are strongly linked with coronary heart disease and are common in type 2 diabetes. However, little is known about the genetic determinants of serum lipids in African populations. An autosomal genome scan was performed for linkage to five plasma lipid phenotypes (total cholesterol, triglycerides (TG), HDL-cholesterol (HDL-C), LDL-cholesterol (LDL-C) and VLDL-cholesterol (VLDL-C)) in the Africa-America Diabetes Mellitus (AADM) study. Two hundred and ninety-five affected sibling pairs with type 2 diabetes mellitus enrolled from Ghana and Nigeria were genotyped for 390 microsatellite markers with an average inter-marker distance of 9cM. Multipoint variance components linkage analysis showed that HDL-C had a LOD score of 4.34 near marker D7S3061 and 3.00 near marker D7S513. Some clustering of linkage evidence to several lipid phenotypes was observed on chromosomes 5 (LDL-C, total cholesterol, VLDL-C), chromosome 7 (HDL-C, TG) and chromosome 19 (total cholesterol, LDL-C, TG). Principal component analysis of the five phenotypes yielded two factors, one (TG, HDL-C and VLDL) of which was linked to QTLs on chromosomes 2, 5 and 7, while the other (total cholesterol and LDL-C) was linked to a different set of QTLs on chromosomes 2, 5 and 18. Several of these regions have been reported to be linked to lipids in other studies. Follow up investigations are warranted in view of the central role serum lipids play in the aetiopathogenesis of cardiovascular disease.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16039295     DOI: 10.1016/j.atherosclerosis.2004.12.049

Source DB:  PubMed          Journal:  Atherosclerosis        ISSN: 0021-9150            Impact factor:   5.162


  16 in total

1.  A genome-wide linkage scan identifies multiple quantitative trait loci for HDL-cholesterol levels in families with premature CAD and MI.

Authors:  Rong Yang; Lin Li; Sara Bretschger Seidelmann; Gong-Qing Shen; Sonia Sharma; Shaoqi Rao; Kalil G Abdullah; Kenneth G Mackinlay; Robert C Elston; Qiuyun Chen; Eric J Topol; Qing Kenneth Wang
Journal:  J Lipid Res       Date:  2010-01-14       Impact factor: 5.922

2.  The genetic architecture of lipoprotein subclasses in Gullah-speaking African American families enriched for type 2 diabetes: the Sea Islands Genetic African American Registry (Project SuGAR).

Authors:  Jasmin Divers; Michèle M Sale; Lingyi Lu; Wei-Min Chen; Kerry H Lok; Ida J Spruill; Jyotika K Fernandes; Carl D Langefeld; W Timothy Garvey
Journal:  J Lipid Res       Date:  2009-09-25       Impact factor: 5.922

3.  Univariate and bivariate linkage analysis identifies pleiotropic loci underlying lipid levels and type 2 diabetes risk.

Authors:  Sandra J Hasstedt; Craig L Hanis; Steven C Elbein
Journal:  Ann Hum Genet       Date:  2010-07       Impact factor: 1.670

4.  Genetic loci for blood lipid levels identified by linkage and association analyses in Caribbean Hispanics.

Authors:  Chuanhui Dong; Ashley Beecham; Liyong Wang; Susan Slifer; Clinton B Wright; Susan H Blanton; Tatjana Rundek; Ralph L Sacco
Journal:  J Lipid Res       Date:  2011-05-10       Impact factor: 5.922

5.  Association analysis of 33 lipoprotein candidate genes in multi-generational families of African ancestry.

Authors:  I Miljkovic; L M Yerges-Armstrong; L H Kuller; A L Kuipers; X Wang; C M Kammerer; C S Nestlerode; C H Bunker; A L Patrick; V W Wheeler; R W Evans; J M Zmuda
Journal:  J Lipid Res       Date:  2010-03-22       Impact factor: 5.922

Review 6.  Genetic susceptibility to cerebrovascular disease.

Authors:  David Della-Morte; Francesca Pacifici; Tatjana Rundek
Journal:  Curr Opin Lipidol       Date:  2016-04       Impact factor: 4.776

7.  Genome scan for loci regulating HDL cholesterol levels in Finnish extended pedigrees with early coronary heart disease.

Authors:  Tiia Kangas-Kontio; Sakari Kakko; Minna Tamminen; Peter von Rohr; Ina Hoeschele; Tatu Juvonen; Juha Kere; Markku J Savolainen
Journal:  Eur J Hum Genet       Date:  2009-11-25       Impact factor: 4.246

Review 8.  Genetic studies of African populations: an overview on disease susceptibility and response to vaccines and therapeutics.

Authors:  Giorgio Sirugo; Branwen J Hennig; Adebowale A Adeyemo; Alice Matimba; Melanie J Newport; Muntaser E Ibrahim; Kelli K Ryckman; Alessandra Tacconelli; Renato Mariani-Costantini; Giuseppe Novelli; Himla Soodyall; Charles N Rotimi; Raj S Ramesar; Sarah A Tishkoff; Scott M Williams
Journal:  Hum Genet       Date:  2008-05-30       Impact factor: 4.132

Review 9.  Genetic epidemiology of type 2 diabetes and cardiovascular diseases in Africa.

Authors:  Fasil Tekola-Ayele; Adebowale A Adeyemo; Charles N Rotimi
Journal:  Prog Cardiovasc Dis       Date:  2013 Nov-Dec       Impact factor: 8.194

10.  The Arg59Trp variant in ANGPTL8 (betatrophin) is associated with total and HDL-cholesterol in American Indians and Mexican Americans and differentially affects cleavage of ANGPTL3.

Authors:  Robert L Hanson; Fatjon Leti; Darwin Tsinajinnie; Sayuko Kobes; Sobha Puppala; Joanne E Curran; Laura Almasy; Donna M Lehman; John Blangero; Ravindranath Duggirala; Johanna K DiStefano
Journal:  Mol Genet Metab       Date:  2016-04-19       Impact factor: 4.797

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.