Literature DB >> 16034213

A novel diagnostic method for human immunodeficiency virus type-1 in plasma by near-infrared spectroscopy.

Akikazu Sakudo1, Roumiana Tsenkova, Taisuke Onozuka, Kazuo Morita, Shuming Li, Jiranan Warachit, Yukie Iwabu, Guimei Li, Takashi Onodera, Kazuyoshi Ikuta.   

Abstract

Presently, the diagnosis of virus infections is based mainly on serological assays. Although polymerase chain reaction (PCR) and enzyme-linked immunosorbent assay (ELISA) have been increasingly used for the diagnosis of such viral infections, the risk of transfusion-transmitted blood-borne viruses remains. Furthermore, PCR and ELISA are expensive and time-consuming, and sometimes cause falsepositive or false-negative results. Therefore, a rapid, accurate and cost-effective diagnostic procedure is needed. We subjected plasma from individuals infected with human immunodeficiency virus type-1 (HIV-1), the causative agent of acquired immune deficiency syndrome (AIDS), as well as plasma from uninfected individuals as a control to near-infrared (NIR) spectroscopy, which may provide a rapid diagnostic method for HIV-1 infection without using any reagent. NIR spectra in the 600-1,000 nm region for plasma from pre-serologically HIV-1-infected individuals and healthy donors were subjected to partial least squares (PLS) regression analysis and leave-out cross-validation to develop a multivariate model to estimate the concentration of HIV-1. Simultaneously, the same plasma samples were examined for HIV-1 p24 by ELISA. The results obtained by the NIR spectroscopy model for HIV-1 yielded a good correlation with those obtained by the reference method (HIV-1 p24 ELISA). These results suggest that NIR spectroscopy using plasma could provide a rapid, accurate, cost-effective tool for large-scale diagnosis of HIV-1 infection.

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Year:  2005        PMID: 16034213     DOI: 10.1111/j.1348-0421.2005.tb03648.x

Source DB:  PubMed          Journal:  Microbiol Immunol        ISSN: 0385-5600            Impact factor:   1.955


  11 in total

1.  Characterization of connective tissues using near-infrared spectroscopy and imaging.

Authors:  Isaac O Afara; Rubina Shaikh; Ervin Nippolainen; William Querido; Jari Torniainen; Jaakko K Sarin; Shital Kandel; Nancy Pleshko; Juha Töyräs
Journal:  Nat Protoc       Date:  2021-01-18       Impact factor: 13.491

Review 2.  Near-Infrared Spectroscopy as a Potential COVID-19 Early Detection Method: A Review and Future Perspective.

Authors:  Muna E Raypah; Asma Nadia Faris; Mawaddah Mohd Azlan; Nik Yusnoraini Yusof; Fariza Hanim Suhailin; Rafidah Hanim Shueb; Irneza Ismail; Fatin Hamimi Mustafa
Journal:  Sensors (Basel)       Date:  2022-06-10       Impact factor: 3.847

3.  Mid-ATR-FTIR spectroscopic profiling of HIV/AIDS sera for novel systems diagnostics in global health.

Authors:  Lungile Sitole; Francois Steffens; Tjaart P J Krüger; Debra Meyer
Journal:  OMICS       Date:  2014-06-17

4.  A spectroscopy approach to the study of virus infection in the endophytic fungus Epichloë festucae.

Authors:  Cristina Petisco; Balbino Garcia-Criado; Iñigo Zabalgogeazcoa; Beatriz R Vázquez-de-Aldana; Antonia Garcia-Ciudad
Journal:  Virol J       Date:  2011-06-08       Impact factor: 4.099

5.  Detection of UV-induced cyclobutane pyrimidine dimers by near-infrared spectroscopy and aquaphotomics.

Authors:  Noriko Goto; Gyorgy Bazar; Zoltan Kovacs; Makoto Kunisada; Hiroyuki Morita; Seiichiro Kizaki; Hiroshi Sugiyama; Roumiana Tsenkova; Chikako Nishigori
Journal:  Sci Rep       Date:  2015-07-02       Impact factor: 4.379

6.  Rapid, noninvasive detection of Zika virus in Aedes aegypti mosquitoes by near-infrared spectroscopy.

Authors:  Jill N Fernandes; Lílha M B Dos Santos; Thaís Chouin-Carneiro; Márcio G Pavan; Gabriela A Garcia; Mariana R David; John C Beier; Floyd E Dowell; Rafael Maciel-de-Freitas; Maggy T Sikulu-Lord
Journal:  Sci Adv       Date:  2018-05-23       Impact factor: 14.136

7.  Essentials of Aquaphotomics and Its Chemometrics Approaches.

Authors:  Roumiana Tsenkova; Jelena Munćan; Bernhard Pollner; Zoltan Kovacs
Journal:  Front Chem       Date:  2018-08-28       Impact factor: 5.221

Review 8.  Near-infrared spectroscopy: promising diagnostic tool for viral infections.

Authors:  Akikazu Sakudo; Yoshikazu Suganuma; Takanori Kobayashi; Takashi Onodera; Kazuyoshi Ikuta
Journal:  Biochem Biophys Res Commun       Date:  2006-01-06       Impact factor: 3.575

9.  High throughput estimates of Wolbachia, Zika and chikungunya infection in Aedes aegypti by near-infrared spectroscopy to improve arbovirus surveillance.

Authors:  Lilha M B Santos; Mathijs Mutsaers; Gabriela A Garcia; Mariana R David; Márcio G Pavan; Martha T Petersen; Jessica Corrêa-Antônio; Dinair Couto-Lima; Louis Maes; Floyd Dowell; Anton Lord; Maggy Sikulu-Lord; Rafael Maciel-de-Freitas
Journal:  Commun Biol       Date:  2021-01-15

10.  Spectral pattern of urinary water as a biomarker of estrus in the giant panda.

Authors:  Kodzue Kinoshita; Mari Miyazaki; Hiroyuki Morita; Maria Vassileva; Chunxiang Tang; Desheng Li; Osamu Ishikawa; Hiroshi Kusunoki; Roumiana Tsenkova
Journal:  Sci Rep       Date:  2012-11-22       Impact factor: 4.379

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