Literature DB >> 16027359

Structure of Mycobacterium tuberculosis glutamine synthetase in complex with a transition-state mimic provides functional insights.

Wojciech W Krajewski1, T Alwyn Jones, Sherry L Mowbray.   

Abstract

Glutamine synthetase catalyzes the ligation of glutamate and ammonia to form glutamine, with the resulting hydrolysis of ATP. The enzyme is a central component of bacterial nitrogen metabolism and is a potential drug target. Here, we report a high-yield recombinant expression system for glutamine synthetase of Mycobacterium tuberculosis together with a simple purification. The procedure allowed the structure of a complex with a phosphorylated form of the inhibitor methionine sulfoximine, magnesium, and ADP to be solved by molecular replacement and refined at 2.1-A resolution. To our knowledge, this study provides the first reported structure for a taut form of the M. tuberculosis enzyme, similar to that observed for the Salmonella enzyme earlier. The phospho compound, generated in situ by an active enzyme, mimics the phosphorylated tetrahedral adduct at the transition state. Some differences in ligand interactions of the protein with both phosphorylated compound and nucleotide are observed compared with earlier structures; a third metal ion also is found. The importance of these differences in the catalytic mechanism is discussed; the results will help guide the search for specific inhibitors of potential therapeutic interest.

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Year:  2005        PMID: 16027359      PMCID: PMC1180770          DOI: 10.1073/pnas.0502248102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models.

Authors:  A Perrakis; T K Sixma; K S Wilson; V S Lamzin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01

2.  The Uppsala Electron-Density Server.

Authors:  Gerard J Kleywegt; Mark R Harris; Jin Yu Zou; Thomas C Taylor; Anders Wählby; T Alwyn Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

3.  Detecting folding motifs and similarities in protein structures.

Authors:  G J Kleywegt; T A Jones
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  Phi/psi-chology: Ramachandran revisited.

Authors:  G J Kleywegt; T A Jones
Journal:  Structure       Date:  1996-12-15       Impact factor: 5.006

5.  Treatment of Mycobacterium tuberculosis with antisense oligonucleotides to glutamine synthetase mRNA inhibits glutamine synthetase activity, formation of the poly-L-glutamate/glutamine cell wall structure, and bacterial replication.

Authors:  G Harth; P C Zamecnik; J Y Tang; D Tabatadze; M A Horwitz
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

6.  Phosphorylation of methionine sulfoximine by glutamine synthetase.

Authors:  R A Ronzio; A Meister
Journal:  Proc Natl Acad Sci U S A       Date:  1968-01       Impact factor: 11.205

7.  Structure prediction and active site analysis of the metal binding determinants in gamma -glutamylcysteine synthetase.

Authors:  J J Abbott; J Pei; J L Ford; Y Qi; V N Grishin; L A Pitcher; M A Phillips; N V Grishin
Journal:  J Biol Chem       Date:  2001-08-29       Impact factor: 5.157

8.  Glutamine synthetase of Mycobacterium tuberculosis: extracellular release and characterization of its enzymatic activity.

Authors:  G Harth; D L Clemens; M A Horwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1994-09-27       Impact factor: 11.205

9.  Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.

Authors:  S T Cole; R Brosch; J Parkhill; T Garnier; C Churcher; D Harris; S V Gordon; K Eiglmeier; S Gas; C E Barry; F Tekaia; K Badcock; D Basham; D Brown; T Chillingworth; R Connor; R Davies; K Devlin; T Feltwell; S Gentles; N Hamlin; S Holroyd; T Hornsby; K Jagels; A Krogh; J McLean; S Moule; L Murphy; K Oliver; J Osborne; M A Quail; M A Rajandream; J Rogers; S Rutter; K Seeger; J Skelton; R Squares; S Squares; J E Sulston; K Taylor; S Whitehead; B G Barrell
Journal:  Nature       Date:  1998-06-11       Impact factor: 49.962

10.  YbdK is a carboxylate-amine ligase with a gamma-glutamyl:Cysteine ligase activity: crystal structure and enzymatic assays.

Authors:  Christopher Lehmann; Victoria Doseeva; Sadhana Pullalarevu; Wojciech Krajewski; Andrew Howard; Osnat Herzberg
Journal:  Proteins       Date:  2004-08-01
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  24 in total

1.  Withdrawn

Authors: 
Journal:  Infect Disord Drug Targets       Date:  2012-11-16

Review 2.  A structural overview of mycobacterial adhesins: Key biomarkers for diagnostics and therapeutics.

Authors:  Flavia Squeglia; Alessia Ruggiero; Alfonso De Simone; Rita Berisio
Journal:  Protein Sci       Date:  2017-12-27       Impact factor: 6.725

3.  Feedback-resistant mutations in Bacillus subtilis glutamine synthetase are clustered in the active site.

Authors:  Susan H Fisher; Lewis V Wray
Journal:  J Bacteriol       Date:  2006-08       Impact factor: 3.490

4.  Structures of the Bacillus subtilis glutamine synthetase dodecamer reveal large intersubunit catalytic conformational changes linked to a unique feedback inhibition mechanism.

Authors:  David S Murray; Nagababu Chinnam; Nam Ky Tonthat; Travis Whitfill; Lewis V Wray; Susan H Fisher; Maria A Schumacher
Journal:  J Biol Chem       Date:  2013-10-24       Impact factor: 5.157

5.  Functional roles of the conserved Glu304 loop of Bacillus subtilis glutamine synthetase.

Authors:  Lewis V Wray; Susan H Fisher
Journal:  J Bacteriol       Date:  2010-07-23       Impact factor: 3.490

6.  Structural basis for feedback and pharmacological inhibition of Saccharomyces cerevisiae glutamate cysteine ligase.

Authors:  Ekaterina I Biterova; Joseph J Barycki
Journal:  J Biol Chem       Date:  2010-03-10       Impact factor: 5.157

7.  Novel trans-Acting Bacillus subtilis glnA mutations that derepress glnRA expression.

Authors:  Susan H Fisher; Lewis V Wray
Journal:  J Bacteriol       Date:  2009-02-20       Impact factor: 3.490

8.  Computational structural analysis and kinetic studies of a cytosolic glutamine synthetase from Camellia sinensis (L.) O. Kuntze.

Authors:  Sudesh Kumar Yadav
Journal:  Protein J       Date:  2009-12       Impact factor: 2.371

9.  Identification of the enzyme responsible for N-acetylation of norfloxacin by Microbacterium sp. Strain 4N2-2.

Authors:  Dae-Wi Kim; Jinhui Feng; Huizhong Chen; Ohgew Kweon; Yuan Gao; Li-Rong Yu; Vanessa J Burrowes; John B Sutherland
Journal:  Appl Environ Microbiol       Date:  2012-10-26       Impact factor: 4.792

Review 10.  Critical Evaluation of the Changes in Glutamine Synthetase Activity in Models of Cerebral Stroke.

Authors:  Thomas M Jeitner; Kevin Battaile; Arthur J L Cooper
Journal:  Neurochem Res       Date:  2015-08-02       Impact factor: 3.996

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