Literature DB >> 16027175

A model of bidirectional synaptic plasticity: from signaling network to channel conductance.

Gastone C Castellani1, Elizabeth M Quinlan, Ferdinando Bersani, Leon N Cooper, Harel Z Shouval.   

Abstract

In many regions of the brain, including the mammalian cortex, the strength of synaptic transmission can be bidirectionally regulated by cortical activity (synaptic plasticity). One line of evidence indicates that long-term synaptic potentiation (LTP) and long-term synaptic depression (LTD), correlate with the phosphorylation/dephosphorylation of sites on the alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor subunit protein GluR1. Bidirectional synaptic plasticity can be induced by different frequencies of presynaptic stimulation, but there is considerable evidence indicating that the key variable is calcium influx through postsynaptic N-methyl-d-aspartate (NMDA) receptors. Here, we present a biophysical model of bidirectional synaptic plasticity based on [Ca2+]-dependent phospho/dephosphorylation of the GluR1 subunit of the AMPA receptor. The primary assumption of the model, for which there is wide experimental support, is that the postsynaptic calcium concentration, and consequent activation of calcium-dependent protein kinases and phosphatases, is the trigger for phosphorylation/dephosphorylation at GluR1 and consequent induction of LTP/LTD. We explore several different mathematical approaches, all of them based on mass-action assumptions. First, we use a first order approach, in which transition rates are functions of an activator, in this case calcium. Second, we adopt the Michaelis-Menten approach with different assumptions about the signal transduction cascades, ranging from abstract to more detailed and biologically plausible models. Despite the different assumptions made in each model, in each case, LTD is induced by a moderate increase in postsynaptic calcium and LTP is induced by high Ca2+ concentration.

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Year:  2005        PMID: 16027175      PMCID: PMC1183261          DOI: 10.1101/lm.80705

Source DB:  PubMed          Journal:  Learn Mem        ISSN: 1072-0502            Impact factor:   2.460


  41 in total

1.  A biophysical model of bidirectional synaptic plasticity: dependence on AMPA and NMDA receptors.

Authors:  G C Castellani; E M Quinlan; L N Cooper; H Z Shouval
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-23       Impact factor: 11.205

2.  A Monte Carlo model reveals independent signaling at central glutamatergic synapses.

Authors:  Kevin M Franks; Thomas M Bartol; Terrence J Sejnowski
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

3.  Converging evidence for a simplified biophysical model of synaptic plasticity.

Authors:  Harel Z Shouval; Gastone C Castellani; Brian S Blais; Luk C Yeung; Leon N Cooper
Journal:  Biol Cybern       Date:  2002-12       Impact factor: 2.086

4.  A unified model of NMDA receptor-dependent bidirectional synaptic plasticity.

Authors:  Harel Z Shouval; Mark F Bear; Leon N Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-22       Impact factor: 11.205

5.  Synaptic homeostasis and input selectivity follow from a calcium-dependent plasticity model.

Authors:  Luk Chong Yeung; Harel Z Shouval; Brian S Blais; Leon N Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-04       Impact factor: 11.205

6.  A mechanism for the Hebb and the anti-Hebb processes underlying learning and memory.

Authors:  J Lisman
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

7.  A physiological basis for a theory of synapse modification.

Authors:  M F Bear; L N Cooper; F F Ebner
Journal:  Science       Date:  1987-07-03       Impact factor: 47.728

8.  Intracellular injections of EGTA block induction of hippocampal long-term potentiation.

Authors:  G Lynch; J Larson; S Kelso; G Barrionuevo; F Schottler
Journal:  Nature       Date:  1983 Oct 20-26       Impact factor: 49.962

9.  Theory for the development of neuron selectivity: orientation specificity and binocular interaction in visual cortex.

Authors:  E L Bienenstock; L N Cooper; P W Munro
Journal:  J Neurosci       Date:  1982-01       Impact factor: 6.167

10.  NMDA induces long-term synaptic depression and dephosphorylation of the GluR1 subunit of AMPA receptors in hippocampus.

Authors:  H K Lee; K Kameyama; R L Huganir; M F Bear
Journal:  Neuron       Date:  1998-11       Impact factor: 17.173

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  24 in total

1.  Toward a microscopic model of bidirectional synaptic plasticity.

Authors:  Gastone C Castellani; Armando Bazzani; Leon N Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-30       Impact factor: 11.205

2.  A unified computational model for cortical post-synaptic plasticity.

Authors:  Tuomo Mäki-Marttunen; Nicolangelo Iannella; Andrew G Edwards; Gaute T Einevoll; Kim T Blackwell
Journal:  Elife       Date:  2020-07-30       Impact factor: 8.140

Review 3.  Molecular mechanisms underlying neuronal synaptic plasticity: systems biology meets computational neuroscience in the wilds of synaptic plasticity.

Authors:  Kim T Blackwell; Joanna Jedrzejewska-Szmek
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2013-09-09

Review 4.  Modeling intracellular signaling underlying striatal function in health and disease.

Authors:  Anu G Nair; Omar Gutierrez-Arenas; Olivia Eriksson; Alexandra Jauhiainen; Kim T Blackwell; Jeanette H Kotaleski
Journal:  Prog Mol Biol Transl Sci       Date:  2014       Impact factor: 3.622

5.  Calcium dynamics predict direction of synaptic plasticity in striatal spiny projection neurons.

Authors:  Joanna Jędrzejewska-Szmek; Sriraman Damodaran; Daniel B Dorman; Kim T Blackwell
Journal:  Eur J Neurosci       Date:  2016-06-15       Impact factor: 3.386

6.  Early-life seizures alter synaptic calcium-permeable AMPA receptor function and plasticity.

Authors:  Jocelyn J Lippman-Bell; Chengwen Zhou; Hongyu Sun; Joel S Feske; Frances E Jensen
Journal:  Mol Cell Neurosci       Date:  2016-08-10       Impact factor: 4.314

7.  Coupled phosphatase and kinase switches produce the tristability required for long-term potentiation and long-term depression.

Authors:  Hyun Jae Pi; John E Lisman
Journal:  J Neurosci       Date:  2008-12-03       Impact factor: 6.167

8.  Temporal sensitivity of protein kinase a activation in late-phase long term potentiation.

Authors:  MyungSook Kim; Ted Huang; Ted Abel; Kim T Blackwell
Journal:  PLoS Comput Biol       Date:  2010-02-26       Impact factor: 4.475

9.  Translational switch for long-term maintenance of synaptic plasticity.

Authors:  Naveed Aslam; Yoshi Kubota; David Wells; Harel Z Shouval
Journal:  Mol Syst Biol       Date:  2009-06-16       Impact factor: 11.429

10.  A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity.

Authors:  Takashi Nakano; Tomokazu Doi; Junichiro Yoshimoto; Kenji Doya
Journal:  PLoS Comput Biol       Date:  2010-02-12       Impact factor: 4.475

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