Literature DB >> 16022664

Nucleotide deoxysugars: essential tools for the glycosylation engineering of novel bioactive compounds.

Carsten Rupprath1, Thomas Schumacher, Lothar Elling.   

Abstract

The irreversible spread of new resistance mechanisms against existing therapeutical antibiotics has led to the development of technologies and strategies for the glycosylation engineering of novel antibiotics. Amino-, C-branched and O-methylated 6-deoxyhexoses play a favourite role in the biosynthesis of clinically important antibiotics like tylosin, erythromycin or oleandomycin and are essential for the antibiotic activity. They are transferred onto the aglycon by glycosyltransferases using dTDP-activated deoxyhexoses. The in vitro biochemical characterization of the biosynthetic enzymes and the glycosyltransferases are, however, hampered due to the poor synthetic access to dTDP-activated deoxysugars and their biosynthetic intermediates. The overcoming of the poor availability of dTDP-activated sugars was the target of several researchers to fulfil their distinct aims with these sugars which were mostly involved in the synthesis of different biological active compounds. Several completely different strategies were used in the past years to improve the availability of dTDP-activated deoxysugars, varying from complete enzymatic synthesis via syntheses using reaction technology for yield optimization to full organic synthesis or shortcuts like the decomposition of commercially available antibiotics and later chemical activation of the sugar moieties. This review gives a survey of the synthesis of dTDP-activated sugars by chemical and chemoenzymatic approaches and discusses the promiscuity of glycosyltransferases to evaluate the chances for applying them for the production of new bioactive compounds. It summarizes the most important enzymes in the field of synthesis using biosynthetic pathway enzymes and describes solutions for occurring challenges during application. Finally, this review will give a survey about the availability of dTDP-activated sugars in sufficient scale and will also point at important sugars which are still bottlenecks and difficult to synthesize and therefore should become a target for enhanced research efforts.

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Year:  2005        PMID: 16022664     DOI: 10.2174/0929867054367167

Source DB:  PubMed          Journal:  Curr Med Chem        ISSN: 0929-8673            Impact factor:   4.530


  18 in total

1.  The structure of GDP-4-keto-6-deoxy-D-mannose-3-dehydratase: a unique coenzyme B6-dependent enzyme.

Authors:  Paul D Cook; James B Thoden; Hazel M Holden
Journal:  Protein Sci       Date:  2006-09       Impact factor: 6.725

2.  Expanding the nucleotide and sugar 1-phosphate promiscuity of nucleotidyltransferase RmlA via directed evolution.

Authors:  Rocco Moretti; Aram Chang; Pauline Peltier-Pain; Craig A Bingman; George N Phillips; Jon S Thorson
Journal:  J Biol Chem       Date:  2011-02-11       Impact factor: 5.157

3.  A structural study of GDP-4-keto-6-deoxy-D-mannose-3-dehydratase: caught in the act of geminal diamine formation.

Authors:  Paul D Cook; Hazel M Holden
Journal:  Biochemistry       Date:  2007-11-13       Impact factor: 3.162

4.  A comparison of sugar indicators enables a universal high-throughput sugar-1-phosphate nucleotidyltransferase assay.

Authors:  Rocco Moretti; Jon S Thorson
Journal:  Anal Biochem       Date:  2008-03-15       Impact factor: 3.365

5.  Characterization of Early Enzymes Involved in TDP-Aminodideoxypentose Biosynthesis en Route to Indolocarbazole AT2433.

Authors:  Pauline Peltier-Pain; Shanteri Singh; Jon S Thorson
Journal:  Chembiochem       Date:  2015-09-18       Impact factor: 3.164

6.  Broadening the scope of glycosyltransferase-catalyzed sugar nucleotide synthesis.

Authors:  Richard W Gantt; Pauline Peltier-Pain; Shanteri Singh; Maoquan Zhou; Jon S Thorson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

7.  Characterization of CalE10, the N-oxidase involved in calicheamicin hydroxyaminosugar formation.

Authors:  Heather D Johnson; Jon S Thorson
Journal:  J Am Chem Soc       Date:  2008-12-31       Impact factor: 15.419

Review 8.  Natural-product sugar biosynthesis and enzymatic glycodiversification.

Authors:  Christopher J Thibodeaux; Charles E Melançon; Hung-wen Liu
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

9.  Direct and stereoselective synthesis of alpha-linked 2-deoxyglycosides.

Authors:  Jin Park; Thomas J Boltje; Geert-Jan Boons
Journal:  Org Lett       Date:  2008-09-03       Impact factor: 6.005

Review 10.  Increasing carbohydrate diversity via amine oxidation: aminosugar, hydroxyaminosugar, nitrososugar, and nitrosugar biosynthesis in bacteria.

Authors:  Shannon C Timmons; Jon S Thorson
Journal:  Curr Opin Chem Biol       Date:  2008-04-18       Impact factor: 8.822

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