Literature DB >> 16022382

TILLING moves beyond functional genomics into crop improvement.

Ann J Slade1, Vic C Knauf.   

Abstract

Transgenic methods have been successfully applied to trait improvement in a number of crops. However, reverse genetics studies by transgenic means are not practical in many commercially important crops, hampering investigations into gene function and the development of novel and improved cultivars. A nontransgenic method for reverse genetics called Targeting Induced Local Lesions IN Genomes (TILLING) has been developed as a method for inducing and identifying novel genetic variation, and has been demonstrated in the model plant, Arabidopsis thaliana. Recently, TILLING has been extended to the improvement of crop plants and shows great promise as a general method for both functional genomics and modulation of key traits in diverse crops.

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Year:  2005        PMID: 16022382     DOI: 10.1007/s11248-005-2770-x

Source DB:  PubMed          Journal:  Transgenic Res        ISSN: 0962-8819            Impact factor:   2.788


  16 in total

Review 1.  Improving plant breeding with exotic genetic libraries.

Authors:  D Zamir
Journal:  Nat Rev Genet       Date:  2001-12       Impact factor: 53.242

Review 2.  Green revolution: the way forward.

Authors:  G S Khush
Journal:  Nat Rev Genet       Date:  2001-10       Impact factor: 53.242

3.  Large-scale discovery of induced point mutations with high-throughput TILLING.

Authors:  Bradley J Till; Steven H Reynolds; Elizabeth A Greene; Christine A Codomo; Linda C Enns; Jessica E Johnson; Chris Burtner; Anthony R Odden; Kim Young; Nicholas E Taylor; Jorja G Henikoff; Luca Comai; Steven Henikoff
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

Review 4.  In-depth mutation and SNP discovery using DHPLC gene scanning.

Authors:  Stan L Lilleberg
Journal:  Curr Opin Drug Discov Devel       Date:  2003-03

5.  Integrated platform for detection of DNA sequence variants using capillary array electrophoresis.

Authors:  Qingbo Li; Zhaowei Liu; Heidi Monroe; Cymbeline T Culiat
Journal:  Electrophoresis       Date:  2002-05       Impact factor: 3.535

6.  Efficient discovery of DNA polymorphisms in natural populations by Ecotilling.

Authors:  Luca Comai; Kim Young; Bradley J Till; Steven H Reynolds; Elizabeth A Greene; Christine A Codomo; Linda C Enns; Jessica E Johnson; Chris Burtner; Anthony R Odden; Steven Henikoff
Journal:  Plant J       Date:  2004-03       Impact factor: 6.417

7.  Mutation detection using a novel plant endonuclease.

Authors:  C A Oleykowski; C R Bronson Mullins; A K Godwin; A T Yeung
Journal:  Nucleic Acids Res       Date:  1998-10-15       Impact factor: 16.971

Review 8.  Methods for genotyping single nucleotide polymorphisms.

Authors:  P Y Kwok
Journal:  Annu Rev Genomics Hum Genet       Date:  2001       Impact factor: 8.929

9.  Transgene-induced RNA interference: a strategy for overcoming gene redundancy in polyploids to generate loss-of-function mutations.

Authors:  Richard J Lawrence; Craig S Pikaard
Journal:  Plant J       Date:  2003-10       Impact factor: 6.417

10.  Plant biochemistry: a naturally decaffeinated arabica coffee.

Authors:  Maria B Silvarolla; Paulo Mazzafera; Luiz C Fazuoli
Journal:  Nature       Date:  2004-06-24       Impact factor: 49.962

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  21 in total

1.  EMS mutagenesis and qPCR-HRM prescreening for point mutations in an embryogenic cell suspension of grapevine.

Authors:  Yosvanis Acanda; Óscar Martínez; María Jesús Prado; María Victoria González; Manuel Rey
Journal:  Plant Cell Rep       Date:  2013-12-21       Impact factor: 4.570

2.  Genome-wide DNA polymorphism and transcriptome analysis of an early-maturing rice mutant.

Authors:  Sun-Goo Hwang; Jin Gyu Hwang; Dong Sub Kim; Cheol Seong Jang
Journal:  Genetica       Date:  2014-01-12       Impact factor: 1.082

3.  Carbon deprivation-driven transcriptome reprogramming in detached developmentally arresting Arabidopsis inflorescences.

Authors:  Alice Trivellini; Rubina Jibran; Lyn M Watson; Erin M O'Donoghue; Antonio Ferrante; Kerry L Sullivan; Paul P Dijkwel; Donald A Hunter
Journal:  Plant Physiol       Date:  2012-08-28       Impact factor: 8.340

4.  Uncovering hidden variation in polyploid wheat.

Authors:  Ksenia V Krasileva; Hans A Vasquez-Gross; Tyson Howell; Paul Bailey; Francine Paraiso; Leah Clissold; James Simmonds; Ricardo H Ramirez-Gonzalez; Xiaodong Wang; Philippa Borrill; Christine Fosker; Sarah Ayling; Andrew L Phillips; Cristobal Uauy; Jorge Dubcovsky
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

5.  Mutations in lettuce improvement.

Authors:  Beiquan Mou
Journal:  Int J Plant Genomics       Date:  2012-01-11

6.  Virus-induced gene silencing of Arabidopsis thaliana gene homologues in wheat identifies genes conferring improved drought tolerance.

Authors:  Harish Manmathan; Dale Shaner; Jacob Snelling; Ned Tisserat; Nora Lapitan
Journal:  J Exp Bot       Date:  2013-01-30       Impact factor: 6.992

7.  High-throughput discovery of chloroplast and mitochondrial DNA polymorphisms in Brassicaceae species by ORG-EcoTILLING.

Authors:  Chang-Li Zeng; Guang-Yong Wang; Jian-Bo Wang; Gui-Xin Yan; Bi-Yun Chen; Kun Xu; Jun Li; Gui-Zhen Gao; Xiao-Ming Wu; Bo Zhao; Lei Liu
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

8.  A TILLING Platform for Functional Genomics in Brachypodium distachyon.

Authors:  Marion Dalmais; Sébastien Antelme; Séverine Ho-Yue-Kuang; Yin Wang; Olivier Darracq; Madeleine Bouvier d'Yvoire; Laurent Cézard; Frédéric Légée; Eddy Blondet; Nicolas Oria; Christelle Troadec; Véronique Brunaud; Lise Jouanin; Herman Höfte; Abdelafid Bendahmane; Catherine Lapierre; Richard Sibout
Journal:  PLoS One       Date:  2013-06-19       Impact factor: 3.240

Review 9.  Insights into the regenerative property of plant cells and their receptivity to transgenesis: wheat as a research case study.

Authors:  Fabienne Delporte; Jean-Marie Jacquemin; Patrick Masson; Bernard Watillon
Journal:  Plant Signal Behav       Date:  2012-10-16

10.  Bioenergy grass feedstock: current options and prospects for trait improvement using emerging genetic, genomic, and systems biology toolkits.

Authors:  Frank Alex Feltus; Joshua P Vandenbrink
Journal:  Biotechnol Biofuels       Date:  2012-11-02       Impact factor: 6.040

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