Literature DB >> 16022283

Expression and DNA binding activity of the recombinant interferon regulatory factor-1 (IRF-1) of mouse.

Meenakshi Upreti1, Pramod C Rath.   

Abstract

Interferon regulatory factor-1 (IRF-1) is a positive transcription factor for genes involved in immune response, cell growth regulation and apoptosis in mammalian cells. Many agents like virus, interferon (IFN), double-stranded RNA (dsRNA), proinflammatory cytokines, prolactin etc. induce IRF-1 at transcriptional level. IRF-1 transcriptionally activates many IRF-1-regulated genes during normal physiological and pathological conditions. We have expressed recombinant mouse IRF-1 (329 amino acids) as a GST(glutathione-S-transferase)-IRF-1 fusion protein from a 1029 bp IRF-1 cDNA in pGEX-2TK expression vector in Escherichia coli XL-1 blue cells. Recombinant GST-IRF-1 was highly expressed as a approximately 66 kDa soluble protein by IPTG-induction, and was biologically active in terms of its DNA binding activity with a 24 bp specific oligonucleotide, i.e. 32P(GAAAGT)4 but not with a similar but nonspecific oligonucleotide i.e. 32P(GAAA)6. GST-alone expressed from the vector did not bind 32P(GAAAGT)4. We observed multiple (1-4) GST-IRF-1-(GAAAGT)4 protein-DNA complexes which were competed out by 25x- to 100x-fold molar excess of (GAAAGT)4 showing that the complexes 1-4 were specific for IRF-1. Such GAAANN (N = any nucleotide) hexanucleotides occur in the promoters of many virus- and interferon-inducible mammalian genes. Multimeric GAAAGT/C sequences are inducible by virus, IFN, dsRNA and IRF-1. Specificity of DNA binding by IRF-1 lies in the 5th and 6th nucleotides in the GAAAGT sequence. Multiple IRF-1-DNA complexes should stimulate transcription by IRF-1.

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Year:  2005        PMID: 16022283     DOI: 10.1007/s11033-004-6940-3

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  56 in total

1.  Characterization of the human p53 gene promoter.

Authors:  S P Tuck; L Crawford
Journal:  Mol Cell Biol       Date:  1989-05       Impact factor: 4.272

2.  Structure of IRF-1 with bound DNA reveals determinants of interferon regulation.

Authors:  C R Escalante; J Yie; D Thanos; A K Aggarwal
Journal:  Nature       Date:  1998-01-01       Impact factor: 49.962

3.  IFN-gamma represses IL-4 expression via IRF-1 and IRF-2.

Authors:  Bernd Elser; Michael Lohoff; Sonja Kock; Marco Giaisi; Sabine Kirchhoff; Peter H Krammer; Min Li-Weber
Journal:  Immunity       Date:  2002-12       Impact factor: 31.745

4.  Degradation of transcription factor IRF-1 by the ubiquitin-proteasome pathway. The C-terminal region governs the protein stability.

Authors:  K Nakagawa; H Yokosawa
Journal:  Eur J Biochem       Date:  2000-03

5.  Complex formation of the interferon (IFN) consensus sequence-binding protein with IRF-1 is essential for murine macrophage IFN-gamma-induced iNOS gene expression.

Authors:  Huabao Xiong; Chen Zhu; Hongxing Li; Frank Chen; Lloyd Mayer; Keiko Ozato; Jay C Unkeless; Scott E Plevy
Journal:  J Biol Chem       Date:  2002-11-11       Impact factor: 5.157

6.  Requirement for IRF-1 in the microenvironment supporting development of natural killer cells.

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Journal:  Nature       Date:  1998-02-12       Impact factor: 49.962

7.  Cooperation of the tumour suppressors IRF-1 and p53 in response to DNA damage.

Authors:  N Tanaka; M Ishihara; M S Lamphier; H Nozawa; T Matsuyama; T W Mak; S Aizawa; T Tokino; M Oren; T Taniguchi
Journal:  Nature       Date:  1996-08-29       Impact factor: 49.962

8.  Functional dissection of the transactivation domain of interferon regulatory factor-1.

Authors:  Eun-Joo Kim; Chong-Ho Park; Jong-Sup Park; Soo-Jong Um
Journal:  Biochem Biophys Res Commun       Date:  2003-05-02       Impact factor: 3.575

9.  Targeted disruption of IRF-1 or IRF-2 results in abnormal type I IFN gene induction and aberrant lymphocyte development.

Authors:  T Matsuyama; T Kimura; M Kitagawa; K Pfeffer; T Kawakami; N Watanabe; T M Kündig; R Amakawa; K Kishihara; A Wakeham
Journal:  Cell       Date:  1993-10-08       Impact factor: 41.582

10.  Interferon regulatory factor (IRF)-1 and IRF-2 regulate interferon gamma-dependent cyclooxygenase 2 expression.

Authors:  J C Blanco; C Contursi; C A Salkowski; D L DeWitt; K Ozato; S N Vogel
Journal:  J Exp Med       Date:  2000-06-19       Impact factor: 14.307

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  7 in total

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Journal:  J Biosci       Date:  2010-12       Impact factor: 1.826

2.  Recombinant human interferon regulatory factor-1 (IRF-1) protein expression and solubilisation study in Escherichia coli.

Authors:  Kumar Mishra Santosh; Kumar Nitish; Kumar Gautam; Kashav Tara; Prakash Krishna
Journal:  Mol Biol Rep       Date:  2018-08-16       Impact factor: 2.316

3.  The characterization of two novel IRF-3 transcripts starting from intron 2 of the wild type of IRF-3.

Authors:  Wei Ren; Hua-Guo Xu; Chao Lu; Rui Jin; Li Zou; Yi Wang; Guo-Ping Zhou
Journal:  Mol Biol Rep       Date:  2010-12-01       Impact factor: 2.316

4.  Mouse interferon regulatory factor-2: expression, purification and DNA binding activity.

Authors:  Krishna Prakash; Pramod C Rath
Journal:  Mol Biol Rep       Date:  2011-05-11       Impact factor: 2.316

5.  Molecular characterization and association analysis of porcine interferon regulatory factor 1 gene.

Authors:  Y Liu; X Lu; Y R Luo; J P Zhou; X Y Liu; J F Liu; X D Ding; Q Zhang
Journal:  Mol Biol Rep       Date:  2010-09-19       Impact factor: 2.316

6.  Differential expression of interferon (IFN) regulatory factors and IFN-stimulated genes at early times after West Nile virus infection of mouse embryo fibroblasts.

Authors:  Svetlana V Scherbik; Bronislava M Stockman; Margo A Brinton
Journal:  J Virol       Date:  2007-09-05       Impact factor: 5.103

7.  Gene Regulatory Network Inference of Immunoresponsive Gene 1 (IRG1) Identifies Interferon Regulatory Factor 1 (IRF1) as Its Transcriptional Regulator in Mammalian Macrophages.

Authors:  Aravind Tallam; Thaneer M Perumal; Paul M Antony; Christian Jäger; Joëlle V Fritz; Laurent Vallar; Rudi Balling; Antonio Del Sol; Alessandro Michelucci
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  7 in total

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