Literature DB >> 16011853

Spatial distribution of Escherichia coli O157-positive farms in Scotland.

Nils Toft1, Giles T Innocent, Iain J McKendrick, Helen E Ternent, Dominic J Mellor, George J Gunn, Barti Synge, Stuart W J Reid.   

Abstract

Using a sample of 949 Scottish farms with finishing cattle, the spatial distribution of Escherichia coli O157-positive farms was investigated using disease mapping models. The overall prevalence of E. coli O157-positive farms was estimated as 22%. The regions used in this study were the 16 postcode areas of Scotland. For each region, the posterior relative risk (RR) was estimated as a model-based alternative to the saturated standardized morbidity ratio (SMR), i.e., the ratio between observed and expected cases in a region. Three Bayesian hierarchical models with generalized linear modeling of the area-specific risks were used to estimate the posterior relative risk of E. coli O157-positive farms in the postcode areas: a random-effects model incorporating only spatially uncorrelated heterogeneity; a model incorporating both spatially correlated and uncorrelated heterogeneity; and a pseudo-mixture model with unstructured correlation and a weighted mix of two variance components representing the spatial correlation and a jump structure. None of the models identified any areas with a significant increase or decrease in risk. The deviance information criteria slightly favored the simplest model (RR range: 0.92--1.09). However, this model appeared to smooth out more of the variation in the RR compared to the pseudo-mixture model, which gave a more informative pattern of the posterior relative risks (range: 0.81--1.22).

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Year:  2005        PMID: 16011853     DOI: 10.1016/j.prevetmed.2005.05.010

Source DB:  PubMed          Journal:  Prev Vet Med        ISSN: 0167-5877            Impact factor:   2.670


  1 in total

1.  Farm-to-fork investigation of an outbreak of Shiga toxin-producing Escherichia coli O157.

Authors:  Deborah Wilson; Gayle Dolan; Heather Aird; Shirley Sorrell; Timothy J Dallman; Claire Jenkins; Lucy Robertson; Russell Gorton
Journal:  Microb Genom       Date:  2018-02-28
  1 in total

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