Literature DB >> 16008458

Long-range electrostatic interactions in hybrid quantum and molecular mechanical dynamics using a lattice summation approach.

François Dehez1, Marília T C Martins-Costa, Daniel Rinaldi, Claude Millot.   

Abstract

A method based on a lattice summation technique for treating long-range electrostatic interactions in hybrid quantum mechanics/molecular mechanics simulations is presented in this article. The quantum subsystem is studied at the semiempirical level, whereas the solvent is described by a two-body potential of molecular mechanics. Molecular dynamics simulations of a (quantum) chloride ion in (classical) water have been performed to test this technique. It is observed that the application of the lattice summations to solvent-solvent interactions as well as on solute-solvent ones has a significant effect on solvation energy and diffusion coefficient. Moreover, two schemes for the computation of the long-range contribution to the electrostatic interaction energy are investigated. The first one replaces the exact charge distribution of the quantum solute by a Mulliken charge distribution. The long-range electrostatic interactions are then calculated for this charge distribution that interacts with the solvent molecule charges. The second one is more accurate and involves a modified Fock operator containing long-range electron-charge interactions. It is shown here that both schemes lead to similar results, the method using Mulliken charges for the evaluation of long-range interactions being, however, much more computationally efficient.

Entities:  

Year:  2005        PMID: 16008458     DOI: 10.1063/1.1931667

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  3 in total

1.  A new smoothing function to introduce long-range electrostatic effects in QM/MM calculations.

Authors:  Dong Fang; Robert E Duke; G Andrés Cisneros
Journal:  J Chem Phys       Date:  2015-07-28       Impact factor: 3.488

Review 2.  Classical electrostatics for biomolecular simulations.

Authors:  G Andrés Cisneros; Mikko Karttunen; Pengyu Ren; Celeste Sagui
Journal:  Chem Rev       Date:  2013-08-27       Impact factor: 60.622

3.  LICHEM 1.1: Recent Improvements and New Capabilities.

Authors:  Hatice Gökcan; Erik Antonio Vázquez-Montelongo; G Andrés Cisneros
Journal:  J Chem Theory Comput       Date:  2019-04-02       Impact factor: 6.006

  3 in total

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