Literature DB >> 16004452

In vitro analysis of the chain termination reaction in the synthesis of poly-(R)-beta-hydroxybutyrate by the class III synthase from Allochromatium vinosum.

Adam G Lawrence1, Joonho Choi, Chokyun Rha, Joanne Stubbe, Anthony J Sinskey.   

Abstract

Allochromatium vinosum polyhydroxyalkanoate synthase catalyzes formation of poly-(R)-3-hydroxybutyrate (PHB) from (R)-3-hydroxybutyryl-coenzyme A (HB-CoA). (R)-3-Hydroxybutyryl-N-acetylcysteamine (HB-NAC) is an alternative substrate for this synthase in vitro, with a turnover 1% that of HB-CoA. With HB-NAC, the molecular weight (M(w)) of PHB produced at substrate-to-enzyme ratios of 1500-15 000 is approximately 75 kDa. (1)H NMR shows that PHB produced has hydroxybutyrate at the alcohol end and N-acetylcysteamine (NAC) at the carboxylate end of the polymer. Exogenous NAC has no effect on the M(w) of PHB produced with HB-CoA or HB-NAC in vitro, whereas PHB from a polymerization reaction with both HB-CoA and HB-NAC has intermediate M(w). These results can be accommodated by two models. In the first, NAC liberated at the active site during polymerization acts as a chain transfer agent. In the second, there is a noncovalent polymer intermediate covalently linked to NAC, which can dissociate from the active site.

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Year:  2005        PMID: 16004452     DOI: 10.1021/bm0501048

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  10 in total

1.  Roles of multiple acetoacetyl coenzyme A reductases in polyhydroxybutyrate biosynthesis in Ralstonia eutropha H16.

Authors:  Charles F Budde; Alison E Mahan; Jingnan Lu; Chokyun Rha; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

2.  Structure of the Catalytic Domain of the Class I Polyhydroxybutyrate Synthase from Cupriavidus necator.

Authors:  Elizabeth C Wittenborn; Marco Jost; Yifeng Wei; JoAnne Stubbe; Catherine L Drennan
Journal:  J Biol Chem       Date:  2016-10-14       Impact factor: 5.157

3.  Trapping of intermediates with substrate analog HBOCoA in the polymerizations catalyzed by class III polyhydroxybutyrate (PHB) synthase from Allochromatium vinosum.

Authors:  Chao Chen; Ruikai Cao; Ruben Shrestha; Christina Ward; Benjamin B Katz; Christopher J Fischer; John M Tomich; Ping Li
Journal:  ACS Chem Biol       Date:  2015-02-25       Impact factor: 5.100

4.  High-throughput screen for poly-3-hydroxybutyrate in Escherichia coli and Synechocystis sp. strain PCC6803.

Authors:  Keith E Tyo; Hang Zhou; Gregory N Stephanopoulos
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

5.  Study of Class I and Class III Polyhydroxyalkanoate (PHA) Synthases with Substrates Containing a Modified Side Chain.

Authors:  Kaimin Jia; Ruikai Cao; Duy H Hua; Ping Li
Journal:  Biomacromolecules       Date:  2016-03-22       Impact factor: 6.988

6.  Detection of covalent and noncovalent intermediates in the polymerization reaction catalyzed by a C149S class III polyhydroxybutyrate synthase.

Authors:  Ping Li; Sumit Chakraborty; JoAnne Stubbe
Journal:  Biochemistry       Date:  2009-10-06       Impact factor: 3.162

7.  Stabilized gene duplication enables long-term selection-free heterologous pathway expression.

Authors:  Keith E J Tyo; Parayil Kumaran Ajikumar; Gregory Stephanopoulos
Journal:  Nat Biotechnol       Date:  2009-07-26       Impact factor: 54.908

8.  Chemistry with an artificial primer of polyhydroxybutyrate synthase suggests a mechanism for chain termination.

Authors:  Rachael M Buckley; JoAnne Stubbe
Journal:  Biochemistry       Date:  2015-03-18       Impact factor: 3.162

9.  Class I Polyhydroxyalkanoate Synthase from the Purple Photosynthetic Bacterium Rhodovulum sulfidophilum Predominantly Exists as a Functional Dimer in the Absence of a Substrate.

Authors:  Mieko Higuchi-Takeuchi; Yoko Motoda; Takanori Kigawa; Keiji Numata
Journal:  ACS Omega       Date:  2017-08-29

10.  Mechanistic insight with HBCH2CoA as a probe to polyhydroxybutyrate (PHB) synthases.

Authors:  Wei Zhang; Ruben Shrestha; Rachael M Buckley; Jamie Jewell; Stefan H Bossmann; JoAnne Stubbe; Ping Li
Journal:  ACS Chem Biol       Date:  2014-06-16       Impact factor: 5.100

  10 in total

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