Literature DB >> 16001547

Determination of total ribonucleotide pool in plant materials by high-pH anion-exchange high-performance liquid chromatography following extraction with potassium hydroxide.

Christophe Riondet1, Sylvain Morel, Gérard Alcaraz.   

Abstract

A new, improved method that only requires a potassium hydroxide extraction procedure is presented for the analysis of a full nucleotide pool in plant materials. Quantification was performed by high-pH anion-exchange chromatography (HPAEC) with UV detection after a potassium hydroxide extraction, and allowed the quantification of 13 linear ribonucleotides in a single run. The method has been validated by comparison of six extraction methods and also by measurement of the intracellular nucleotide levels of three plant species (cell cultures and leaves). The evolution of the nucleotide pool of Nicotiana tabacum cell culture during growth has also been measured, and showed an increase in the pool until the fifth day, where the growth rate reaches a maximum, after which a decrease was observed.

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Year:  2005        PMID: 16001547     DOI: 10.1016/j.chroma.2005.04.036

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  4 in total

1.  A highly sensitive quantification method for the accumulation of alarmone ppGpp in Arabidopsis thaliana using UPLC-ESI-qMS/MS.

Authors:  Yuta Ihara; Hiroyuki Ohta; Shinji Masuda
Journal:  J Plant Res       Date:  2015-03-10       Impact factor: 2.629

2.  Maf/ham1-like pyrophosphatases of non-canonical nucleotides are host-specific partners of viral RNA-dependent RNA polymerases.

Authors:  Adrian A Valli; Rafael García López; María Ribaya; Francisco Javier Martínez; Diego García Gómez; Beatriz García; Irene Gonzalo; Alfonso Gonzalez de Prádena; Fabio Pasin; Inmaculada Montanuy; Encarnación Rodríguez-Gonzalo; Juan Antonio García
Journal:  PLoS Pathog       Date:  2022-02-18       Impact factor: 6.823

3.  Enhanced nucleotide analysis enables the quantification of deoxynucleotides in plants and algae revealing connections between nucleoside and deoxynucleoside metabolism.

Authors:  Henryk Straube; Markus Niehaus; Sarah Zwittian; Claus-Peter Witte; Marco Herde
Journal:  Plant Cell       Date:  2021-04-17       Impact factor: 11.277

Review 4.  Analysis of Nucleosides and Nucleotides in Plants: An Update on Sample Preparation and LC-MS Techniques.

Authors:  Henryk Straube; Claus-Peter Witte; Marco Herde
Journal:  Cells       Date:  2021-03-20       Impact factor: 6.600

  4 in total

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