Literature DB >> 15986097

Stationary cell size distributions and mean protein chain length distributions of Archaea, Bacteria and Eukaryotes described with an increment model in terms of irreversible thermodynamics.

H G Kilian1, H Gruler, D Bartkowiak, D Kaufmann.   

Abstract

In terms of an increment model irreversible thermodynamics allows to formulate general relations of stationary cell size distributions observed in growing colonies. The treatment is based on the following key postulates: i) The growth dynamics covers a broad spectrum of fast and slow processes. ii) Slow processes are considered to install structural patterns that operate in short periods as temporary stationary states of reference in the sense of irreversible thermodynamics. iii) Distortion during growth is balanced out via the many fast processes until an optimized stationary state is achieved. The relation deduced identifies the numerous different stationary patterns as equivalents, predicting that they should fall on one master curve. Stationary cell size distributions of different cell types, like Hyperphilic archaea, E. coli (Prokaryotes) and S. cerevisiae (Eukaryotes), altogether taken from the literature, are in fact consistently described. As demanded by the model they agree together with the same master curve. Considering the "protein factories" as subsystems of cells the mean protein chain length distributions deduced from completely sequenced genomes should be optimized. In fact, the mean course can be described with analogous relations as used above. Moreover, the master curve fits well to the patterns of different species of Archaea, Bacteria and Eukaryotes. General consequences are discussed.

Entities:  

Mesh:

Year:  2005        PMID: 15986097     DOI: 10.1140/epje/i2004-10143-8

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  17 in total

1.  Comparing function and structure between entire proteomes.

Authors:  J Liu; B Rost
Journal:  Protein Sci       Date:  2001-10       Impact factor: 6.725

2.  Mathematics. Where drunkards hang out.

Authors:  I Stewart
Journal:  Nature       Date:  2001-10-18       Impact factor: 49.962

Review 3.  Cytokinesis in prokaryotes and eukaryotes: common principles and different solutions.

Authors:  N Nanninga
Journal:  Microbiol Mol Biol Rev       Date:  2001-06       Impact factor: 11.056

4.  Cell adhesion as wetting transition?

Authors:  Erich Sackmann; Robijn F Bruinsma
Journal:  Chemphyschem       Date:  2002-03-12       Impact factor: 3.102

5.  The transition between different physiological states during balanced growth of Salmonella typhimurium.

Authors:  N O KJELDGAARD; O MAALOE; M SCHAECHTER
Journal:  J Gen Microbiol       Date:  1958-12

6.  Dependency on medium and temperature of cell size and chemical composition during balanced grown of Salmonella typhimurium.

Authors:  M SCHAECHTER; O MAALOE; N O KJELDGAARD
Journal:  J Gen Microbiol       Date:  1958-12

7.  [On the fine structure of chromosomes. I. On the cytology of Escherichia coli. A. Electronoptic findings].

Authors:  F W SCHLOTE
Journal:  Arch Mikrobiol       Date:  1961

8.  FtsZ dynamics during the division cycle of live Escherichia coli cells.

Authors:  Q Sun; W Margolin
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

9.  Growth during the bacterial cell cycle: analysis of cell size distribution.

Authors:  H E Kubitschek
Journal:  Biophys J       Date:  1969-06       Impact factor: 4.033

10.  Further characterization of a size control gene in Saccharomyces cerevisiae.

Authors:  F R Cross
Journal:  J Cell Sci Suppl       Date:  1989
View more
  3 in total

1.  Zeta potential of selected bacteria in drinking water when dead, starved, or exposed to minimal and rich culture media.

Authors:  Kamlesh A Soni; Ashwin K Balasubramanian; Ali Beskok; Suresh D Pillai
Journal:  Curr Microbiol       Date:  2007-11-06       Impact factor: 2.188

2.  The general growth logistics of cell populations.

Authors:  H G Kilian; D Bartkowiak; D Kaufmann; R Kemkemer
Journal:  Cell Biochem Biophys       Date:  2008-05-21       Impact factor: 2.194

3.  Perturbations of Transcription and Gene Expression-Associated Processes Alter Distribution of Cell Size Values in Saccharomyces cerevisiae.

Authors:  Nairita Maitra; Jayamani Anandhakumar; Heidi M Blank; Craig D Kaplan; Michael Polymenis
Journal:  G3 (Bethesda)       Date:  2019-01-09       Impact factor: 3.154

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.