Literature DB >> 15984880

5-endo-dig radical cyclizations: "the poor cousins" of the radical cyclizations family.

Igor V Alabugin1, Mariappan Manoharan.   

Abstract

Kinetics and thermodynamics of 5-endo-dig radical cyclizations were studied using a combination of DFT computations and Marcus theory. When the reactant is stabilized by conjugation of the radical center with the bridge pi-system, the cyclization starts with reorientation of the radical orbital needed to reach the in-plane acetylene pi-orbital in the bond-forming step. This reorientation leads to loss of the above conjugative stabilization, increases the activation energy, and renders such cyclizations less exothermic. As a result, even when the radical needed for the 5-endo cyclization is formed efficiently, it undergoes either H-abstraction or equilibration with an isomeric radical. Only when the bridging moiety is saturated or when intramolecular constraints prevent the overlap of the bridge pi-orbital and the radical center, 5-endo cyclizations may be able to proceed with moderate efficiency under conditions when H-abstraction is slow. The main remaining caveat in designing such geometrically constrained 5-endo-dig cyclizations is their sensitivity to strain effects, especially when polycyclic systems are formed. The strain effects can be counterbalanced by increasing the stabilization of the product (e.g., by introducing heteroatoms into the bridging moiety). Electronic effects of such substitutions can be manifested in various ways, ranging from aromatic stabilization to a hyperconjugative beta-Si effect. The 4-exo-dig cyclization is kinetically competitive with the 5-endo-dig process but less favorable thermodynamically. As a result, by proper design of reaction conditions, 5-endo-dig radical cyclizations should be experimentally feasible.

Entities:  

Year:  2005        PMID: 15984880     DOI: 10.1021/ja050976h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

Review 1.  5-Endo-dig cyclizations in organic syntheses.

Authors:  Muhammad Aamir Sajid; Zulfiqar Ali Khan; Sohail Anjum Shahzad; Syed Ali Raza Naqvi; Muhammad Usman
Journal:  Mol Divers       Date:  2019-03-05       Impact factor: 2.943

2.  Catalytic enantioselective synthesis of indanes by a cation-directed 5-endo-trig cyclization.

Authors:  Craig P Johnston; Abhishek Kothari; Tetiana Sergeieva; Sergiy I Okovytyy; Kelvin E Jackson; Robert S Paton; Martin D Smith
Journal:  Nat Chem       Date:  2015-01-12       Impact factor: 24.427

3.  Fine-tuning alkyne cycloadditions: Insights into photochemistry responsible for the double-strand DNA cleavage via structural perturbations in diaryl alkyne conjugates.

Authors:  Wang-Yong Yang; Samantha A Marrone; Nalisha Minors; Diego A R Zorio; Igor V Alabugin
Journal:  Beilstein J Org Chem       Date:  2011-06-16       Impact factor: 2.883

  3 in total

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